RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 EXOSC1Q9Y3B2 195 aaKnown RBP18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 H0YGG7 62 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 LALBAP00709 142 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 RNF144AP50876 292 aaPredicted RBP18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 DEFA1P59665 94 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 DEFA3P59666 94 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 ARF3P61204 181 aaPredicted RBP18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 HNRNPA0Q13151 305 aaKnown RBP18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 DUSP8Q13202 625 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 PGGHGQ32M88 737 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 TMPRSS11AQ6ZMR5 421 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 SYT14Q8NB59 555 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 CAMKVQ8NCB2 501 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 OR5T3Q8NGG3 340 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 C1GALT1C1Q96EU7 318 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 FAM210AQ96ND0 272 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 WDFY2Q96P53 400 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 ZFYVE21Q9BQ24 234 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 PRRG3Q9BZD7 231 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 PLEKHB1Q9UF11 243 aaPredicted RBP18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 C19orf53Q9UNZ5 99 aaPredicted RBP18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 SLC35F4A4IF30 521 aa18.19■□□□□ 0.5
CDC42EP1-201ENST00000249014 URADA6NGE7 173 aa18.19■□□□□ 0.5
CDC42EP1-201ENST00000249014 TNFRSF10CO14798 259 aa18.19■□□□□ 0.5
CDC42EP1-201ENST00000249014 FGF17O60258 216 aa18.19■□□□□ 0.5
CDC42EP1-201ENST00000249014 SDC2P34741 201 aa18.19■□□□□ 0.5
CDC42EP1-201ENST00000249014 SLC1A3P43003 542 aa18.19■□□□□ 0.5
CDC42EP1-201ENST00000249014 TPMTP51580 245 aa18.19■□□□□ 0.5
CDC42EP1-201ENST00000249014 RUNX1T1Q06455 604 aa18.19■□□□□ 0.5
CDC42EP1-201ENST00000249014 ABHD13Q7L211 337 aa18.19■□□□□ 0.5
CDC42EP1-201ENST00000249014 OR8H2Q8N162 312 aa18.19■□□□□ 0.5
CDC42EP1-201ENST00000249014 CELF2-AS1Q8N7Q2 184 aa18.19■□□□□ 0.5
CDC42EP1-201ENST00000249014 PSD4Q8NDX1 1056 aa18.19■□□□□ 0.5
CDC42EP1-201ENST00000249014 PRSS27Q9BQR3 290 aa18.19■□□□□ 0.5
CDC42EP1-201ENST00000249014 ZNF350Q9GZX5 532 aa18.19■□□□□ 0.5
CDC42EP1-201ENST00000249014 PIGUQ9H490 435 aa18.19■□□□□ 0.5
CDC42EP1-201ENST00000249014 KCNE5Q9UJ90 142 aa18.19■□□□□ 0.5
CDC42EP1-201ENST00000249014 CMAHPQ9Y471 501 aa18.19■□□□□ 0.5
CDC42EP1-201ENST00000249014 CSNK1G3Q9Y6M4 447 aa18.19■□□□□ 0.5
CDC42EP1-201ENST00000249014 SMIM30A4D0T7 59 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 LRRC72A6NJI9 287 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 HTR2AP28223 471 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 FABP5Q01469 135 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 SFSWAPQ12872 951 aaKnown RBP18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 WDR88Q6ZMY6 472 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 TRIM48Q8IWZ4 208 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 SAMD8Q96LT4 415 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 RIPOR3Q96MK2 946 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 ZNF649Q9BS31 505 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 MIXL1Q9H2W2 232 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 ISYNA1Q9NPH2 558 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 CEP290O15078 2479 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 NPIPA5A0A0B4J1W7 369 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 TMEM221A6NGB7 291 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 NPIPA7E9PJI5 369 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 GKN3PP0CG01 181 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 NPIPA8P0DM63 369 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 FUT1P19526 365 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 KRR1Q13601 381 aaKnown RBP18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 HTR4Q13639 388 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 BAK1Q16611 211 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 CRTC2Q53ET0 693 aaPredicted RBP18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 EXOSC6Q5RKV6 272 aaKnown RBP18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 DCST2Q5T1A1 773 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 QSOX2Q6ZRP7 698 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 CLDN22Q8N7P3 220 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 UFD1Q92890 307 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 RFKQ969G6 155 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 KCTD7Q96MP8 289 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 IL21RQ9HBE5 538 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 ABCB9Q9NP78 766 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 NLGN3Q9NZ94 848 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 CDH10Q9Y6N8 788 aa18.18■□□□□ 0.5
CDC42EP1-201ENST00000249014 PEX12O00623 359 aa18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 ATP1B1P05026 303 aa18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 THBS1P07996 1170 aa18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 ZGLP1P0C6A0 271 aa18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 RPS4Y1P22090 263 aaKnown RBP18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 AZGP1P25311 298 aaKnown RBP18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 HSDL2Q6YN16 418 aa18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 ZNF619Q8N2I2 560 aa18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 ITFG2Q969R8 447 aa18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 MSLNLQ96KJ4 702 aa18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 SRRQ9GZT4 340 aa18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 TCEAL2Q9H3H9 227 aaPredicted RBP18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 SLC28A3Q9HAS3 691 aa18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 CACYBPQ9HB71 228 aaKnown RBP18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 LYRM4Q9HD34 91 aa18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 CBLCQ9ULV8 474 aa18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 CYR61O00622 381 aa18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 SLC30A4O14863 429 aa18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 ZNF10P21506 573 aaPredicted RBP18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 GABRA5P31644 462 aa18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 TMED10P49755 219 aaKnown RBP18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 FXYD6P3P58550 94 aa18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 SHC2P98077 582 aa18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 ZNF155Q12901 538 aaPredicted RBP18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 ADAM15Q13444 863 aa18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 EIPR1Q53HC9 387 aa18.17■□□□□ 0.5
CDC42EP1-201ENST00000249014 MRPL2Q5T653 305 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms