RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 ADPRHP54922 357 aa20.19■□□□□ 0.82
SH2D3A-201ENST00000245908 SEC13P55735 322 aa20.19■□□□□ 0.82
SH2D3A-201ENST00000245908 SNRPNP63162 240 aaKnown RBP20.19■□□□□ 0.82
SH2D3A-201ENST00000245908 RACK1P63244 317 aaKnown RBP20.19■□□□□ 0.82
SH2D3A-201ENST00000245908 C19orf57Q0VDD7 668 aa20.19■□□□□ 0.82
SH2D3A-201ENST00000245908 ZNF836Q6ZNA1 936 aa20.19■□□□□ 0.82
SH2D3A-201ENST00000245908 GALNT12Q8IXK2 581 aa20.19■□□□□ 0.82
SH2D3A-201ENST00000245908 SAMD14Q8IZD0 417 aaPredicted RBP20.19■□□□□ 0.82
SH2D3A-201ENST00000245908 SUN5Q8TC36 379 aa20.19■□□□□ 0.82
SH2D3A-201ENST00000245908 COQ7Q99807 217 aa20.19■□□□□ 0.82
SH2D3A-201ENST00000245908 NLGN3Q9NZ94 848 aa20.19■□□□□ 0.82
SH2D3A-201ENST00000245908 KCMF1Q9P0J7 381 aa20.19■□□□□ 0.82
SH2D3A-201ENST00000245908 PHF11Q9UIL8 331 aa20.19■□□□□ 0.82
SH2D3A-201ENST00000245908 WDR45Q9Y484 360 aa20.19■□□□□ 0.82
SH2D3A-201ENST00000245908 DOCK8Q8NF50 2099 aa20.19■□□□□ 0.82
SH2D3A-201ENST00000245908 TMCC2O75069 709 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 CRYZL1O95825 349 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 EML2O95834 649 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 CPN2P22792 545 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 NDUFS1P28331 727 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 RPS5P46782 204 aaKnown RBP20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 COL9A2Q14055 689 aaPredicted RBP20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 ARHGAP11BQ3KRB8 267 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 PDZK1Q5T2W1 519 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 OR2L13Q8N349 312 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 KLHL36Q8N4N3 616 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 ARIH2OSQ8N7S6 290 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 ST6GAL2Q96JF0 529 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 KXD1Q9BQD3 176 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 TMEM246Q9BRR3 403 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 JAM3Q9BX67 310 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 SCN3AQ9NY46 2000 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 SMIM30A4D0T7 59 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 NARSO43776 548 aaKnown RBP20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 NAT1P18440 290 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 ITPRIPL2Q3MIP1 535 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 RFPL4BQ6ZWI9 263 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 CAMKK1Q8N5S9 505 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 OR52N1Q8NH53 320 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 CACYBPQ9HB71 228 aaKnown RBP20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 CBLCQ9ULV8 474 aa20.18■□□□□ 0.82
SH2D3A-201ENST00000245908 GRXCR1A8MXD5 290 aa20.17■□□□□ 0.82
SH2D3A-201ENST00000245908 K7EQS6 105 aa20.17■□□□□ 0.82
SH2D3A-201ENST00000245908 SLC31A1O15431 190 aa20.17■□□□□ 0.82
SH2D3A-201ENST00000245908 CHST10O43529 356 aa20.17■□□□□ 0.82
SH2D3A-201ENST00000245908 AKAP8O43823 692 aaKnown RBP20.17■□□□□ 0.82
SH2D3A-201ENST00000245908 SLC35G6P0C7Q6 338 aa20.17■□□□□ 0.82
SH2D3A-201ENST00000245908 GDI1P31150 447 aa20.17■□□□□ 0.82
SH2D3A-201ENST00000245908 PPP3R1P63098 170 aa20.17■□□□□ 0.82
SH2D3A-201ENST00000245908 GALK2Q01415 458 aa20.17■□□□□ 0.82
SH2D3A-201ENST00000245908 BBS1Q8NFJ9 593 aa20.17■□□□□ 0.82
SH2D3A-201ENST00000245908 OR2T33Q8NG76 320 aa20.17■□□□□ 0.82
SH2D3A-201ENST00000245908 OR4K14Q8NGD5 310 aa20.17■□□□□ 0.82
SH2D3A-201ENST00000245908 COL26A1Q96A83 441 aa20.17■□□□□ 0.82
SH2D3A-201ENST00000245908 TM4SF19Q96DZ7 209 aa20.17■□□□□ 0.82
SH2D3A-201ENST00000245908 SLC6A17Q9H1V8 727 aa20.17■□□□□ 0.82
SH2D3A-201ENST00000245908 SLC7A7Q9UM01 511 aa20.17■□□□□ 0.82
SH2D3A-201ENST00000245908 LINC00854A0A1B0GVQ3 168 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 FAM25AB3EWG3 89 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 FAM25CB3EWG5 89 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 FAM25GB3EWG6 89 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 HMGN1P05114 100 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 SMIM10L1P0DMW3 83 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 NDUFV2P19404 249 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 ZNF136P52737 540 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 P2RX3P56373 397 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 EIPR1Q53HC9 387 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 FBXO42Q6P3S6 717 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 GATAD2AQ86YP4 633 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 SMIM10Q96HG1 83 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 SERINC2Q96SA4 455 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 MTIF3Q9H2K0 278 aaKnown RBP20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 TBC1D3DA0A087WVF3 549 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 TBC1D3IA0A087WXS9 549 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 TBC1D3EA0A087X179 549 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 MEIOCA2RUB1 952 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 TBC1D3LB9A6J9 549 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 CDC42EP2O14613 210 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 CASKO14936 926 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 TBC1D3HP0C7X1 549 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 TRAPPC2P0DI81 140 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 TRAPPC2BP0DI82 140 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 TNFRSF4P43489 277 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 CAV3P56539 151 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 EEF1A1P68104 462 aaKnown RBP20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 SUZ12Q15022 739 aaKnown RBP20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 DUSP5Q16690 384 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 PYDC2Q56P42 97 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 TBC1D3CQ6IPX1 549 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 TBC1D3Q8IZP1 549 aaPredicted RBP20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 FLVCR1-AS1Q8TAF5 88 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 DCLRE1CQ96SD1 692 aaKnown RBP20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 PHOX2BQ99453 314 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 GDF15Q99988 308 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 C11orf54Q9H0W9 315 aaPredicted RBP20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 KRCC1Q9NPI7 259 aaPredicted RBP20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 HINT3Q9NQE9 182 aaKnown RBP20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 DZANK1Q9NVP4 752 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 PTGFRNQ9P2B2 879 aa20.16■□□□□ 0.82
SH2D3A-201ENST00000245908 SLC2A10O95528 541 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms