RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 TNK1Q13470 666 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 GAB1Q13480 694 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 C6orf163Q5TEZ5 329 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 ACSM2BQ68CK6 577 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 PLEKHM3Q6ZWE6 761 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 PAGE2Q7Z2X7 111 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 BTLAQ7Z6A9 289 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 ZNF615Q8N8J6 731 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 STON2Q8WXE9 905 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 PPP1R36Q96LQ0 422 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 SFXN2Q96NB2 322 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 SECISBP2Q96T21 854 aaKnown RBP12.47□□□□□ -0.41
DDX39A-201ENST00000242776 KLHL4Q9C0H6 718 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 FAM107BQ9H098 131 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 WDR41Q9HAD4 459 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 LRTM1Q9HBL6 345 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 TAS2R10Q9NYW0 307 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 KLHL14Q9P2G3 628 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 TMED5Q9Y3A6 229 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 PTGDR2Q9Y5Y4 395 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 MXRA5Q9NR99 2828 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 CUBNO60494 3623 aa12.47□□□□□ -0.41
DDX39A-201ENST00000242776 A0A0G2JND7 137 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 RNF223E7ERA6 249 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 SDHDO14521 159 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 PPM1BO75688 479 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 JUNP05412 331 aaKnown RBP12.46□□□□□ -0.41
DDX39A-201ENST00000242776 DRD4P21917 467 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 GPX3P22352 226 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 MAPK1P28482 360 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 CCKARP32238 428 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 PLCXD2Q0VAA5 305 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 EXOSC7Q15024 291 aaKnown RBP12.46□□□□□ -0.41
DDX39A-201ENST00000242776 EXOC3L2Q2M3D2 409 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 SMU1Q2TAY7 513 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 GALNTL6Q49A17 601 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 FAM219BQ5XKK7 198 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 NXNQ6DKJ4 435 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 ZNF474Q6S9Z5 364 aaPredicted RBP12.46□□□□□ -0.41
DDX39A-201ENST00000242776 FAM111BQ6SJ93 734 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 EPGNQ6UW88 154 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 C20orf204Q6ZNR8 217 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 C22orf34Q6ZV56 151 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 ADGRE4PQ86SQ3 457 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 NUDT13Q86X67 352 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 ZCCHC7Q8N3Z6 543 aaKnown RBP12.46□□□□□ -0.41
DDX39A-201ENST00000242776 ADCY4Q8NFM4 1077 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 HGDQ93099 445 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 STARD4Q96DR4 205 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 OMA1Q96E52 524 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 THOC1Q96FV9 657 aaKnown RBP12.46□□□□□ -0.41
DDX39A-201ENST00000242776 ZNF717Q9BY31 904 aaPredicted RBP12.46□□□□□ -0.41
DDX39A-201ENST00000242776 ITPAQ9BY32 194 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 GSX2Q9BZM3 304 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 BRINP2Q9C0B6 783 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 C1orf109Q9NX04 203 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 LYARQ9NX58 379 aaKnown RBP12.46□□□□□ -0.41
DDX39A-201ENST00000242776 HEY2Q9UBP5 337 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 DCTN4Q9UJW0 460 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 FBXL2Q9UKC9 423 aa12.46□□□□□ -0.41
DDX39A-201ENST00000242776 A0A0A6YYD5 115 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 ZNF195O14628 629 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 MSTNO14793 375 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 LSM1O15116 133 aaKnown RBP12.46□□□□□ -0.42
DDX39A-201ENST00000242776 UGT2B11O75310 529 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 SEC22BO75396 215 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 PLAUP00749 431 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 LBPP18428 481 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 BSGP35613 385 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 UGT2B10P36537 528 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 LHX2P50458 406 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 ARFIP2P53365 341 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 ATP5J2P56134 94 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 KRTAP1-1Q07627 177 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 DMTNQ08495 405 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 SLC9B1Q4ZJI4 515 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 MRM1Q6IN84 353 aaKnown RBP12.46□□□□□ -0.42
DDX39A-201ENST00000242776 ALKBH2Q6NS38 261 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 CGB2Q6NT52 195 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 SLC30A6Q6NXT4 461 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 Q6ZSR9 355 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 CHMP1BQ7LBR1 199 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 SPATA21Q7Z572 469 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 METTL4Q8N3J2 472 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 WDSUB1Q8N9V3 476 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 FNDC5Q8NAU1 212 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 OR2T11Q8NH01 316 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 CEP70Q8NHQ1 597 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 RFWD2Q8NHY2 731 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 ACTRT2Q8TDY3 377 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 TMEM171Q8WVE6 324 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 MAELQ96JY0 434 aaKnown RBP12.46□□□□□ -0.42
DDX39A-201ENST00000242776 C3orf30Q96M34 536 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 CCDC28BQ9BUN5 200 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 TMEM120AQ9BXJ8 343 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 MRPL1Q9BYD6 325 aaKnown RBP12.46□□□□□ -0.42
DDX39A-201ENST00000242776 OR2B2Q9GZK3 357 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 TCF7L2Q9NQB0 619 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 DKKL1Q9UK85 242 aa12.46□□□□□ -0.42
DDX39A-201ENST00000242776 ADAM29Q9UKF5 820 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms