RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 PAPOLBQ9NRJ5 636 aaKnown RBP14.07□□□□□ -0.16
HDHD3-201ENST00000238379 SEMA4GQ9NTN9 838 aa14.07□□□□□ -0.16
HDHD3-201ENST00000238379 PCDHGA10Q9Y5H3 936 aa14.07□□□□□ -0.16
HDHD3-201ENST00000238379 SH3PXD2BA1X283 911 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 B4E171 279 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 H3BNH8 94 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 FAAHO00519 579 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 UGT2B11O75310 529 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 SEC24DO94855 1032 aaPredicted RBP14.06□□□□□ -0.16
HDHD3-201ENST00000238379 HEXBP07686 556 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 CCNYL3P0C7X3 344 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 CYP4B1P13584 511 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 TSPAN7P41732 249 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 CLK3P49761 638 aaKnown RBP14.06□□□□□ -0.16
HDHD3-201ENST00000238379 GPR143P51810 404 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 NPRL3Q12980 569 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 ZNF141Q15928 474 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.06□□□□□ -0.16
HDHD3-201ENST00000238379 PDZK1Q5T2W1 519 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 MRPL14Q6P1L8 145 aaKnown RBP14.06□□□□□ -0.16
HDHD3-201ENST00000238379 TTC33Q6PID6 262 aaPredicted RBP14.06□□□□□ -0.16
HDHD3-201ENST00000238379 ANKRD37Q7Z713 158 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 C8orf59Q8N0T1 100 aaPredicted RBP14.06□□□□□ -0.16
HDHD3-201ENST00000238379 OR1N1Q8NGS0 311 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 LRFN5Q96NI6 719 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 MCHR1Q99705 422 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 CMKLR1Q99788 373 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 MESP1Q9BRJ9 268 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 MYRFQ9Y2G1 1151 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 POFUT2Q9Y2G5 429 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 OTOGLQ3ZCN5 2332 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 AP3D1O14617 1153 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 BCKDKO14874 412 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 ALOX12BO75342 701 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 BCAS1O75363 584 aaPredicted RBP14.06□□□□□ -0.16
HDHD3-201ENST00000238379 SMIM18P0DKX4 95 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 PRG2P13727 222 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 POU2F1P14859 743 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 AGXTP21549 392 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 RNF144AP50876 292 aaPredicted RBP14.06□□□□□ -0.16
HDHD3-201ENST00000238379 EMP2P54851 167 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 TAS2R41P59536 307 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 ILKQ13418 452 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 IL18R1Q13478 541 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 EBPQ15125 230 aaKnown RBP14.06□□□□□ -0.16
HDHD3-201ENST00000238379 CCDC157Q569K6 752 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 ENTPD8Q5MY95 495 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 ZNF691Q5VV52 312 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 PODNL1Q6PEZ8 512 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 THAP5Q7Z6K1 395 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 C9orf40Q8IXQ3 194 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 ZNF786Q8N393 782 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 ADAMTS16Q8TE57 1224 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 GTPBP3Q969Y2 492 aaKnown RBP14.06□□□□□ -0.16
HDHD3-201ENST00000238379 LCORQ96JN0 433 aaPredicted RBP14.06□□□□□ -0.16
HDHD3-201ENST00000238379 LMF1Q96S06 567 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 SLC39A1Q9NY26 324 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 NDRG4Q9ULP0 352 aaKnown RBP14.06□□□□□ -0.16
HDHD3-201ENST00000238379 NTNG1Q9Y2I2 539 aa14.06□□□□□ -0.16
HDHD3-201ENST00000238379 KIF26BQ2KJY2 2108 aa14.05□□□□□ -0.16
HDHD3-201ENST00000238379 IGHV3-20A0A0C4DH32 117 aa14.05□□□□□ -0.16
HDHD3-201ENST00000238379 C2orf92A0A1B0GVN3 265 aa14.05□□□□□ -0.16
HDHD3-201ENST00000238379 FRG2CA6NGY1 282 aa14.05□□□□□ -0.16
HDHD3-201ENST00000238379 CPSF4LA6NMK7 179 aaKnown RBP14.05□□□□□ -0.16
HDHD3-201ENST00000238379 C4orf47A7E2U8 309 aa14.05□□□□□ -0.16
HDHD3-201ENST00000238379 CYP7B1O75881 506 aa14.05□□□□□ -0.16
HDHD3-201ENST00000238379 THY1P04216 161 aa14.05□□□□□ -0.16
HDHD3-201ENST00000238379 ATP12AP54707 1039 aa14.05□□□□□ -0.16
HDHD3-201ENST00000238379 ISL1P61371 349 aa14.05□□□□□ -0.16
HDHD3-201ENST00000238379 E2F1Q01094 437 aa14.05□□□□□ -0.16
HDHD3-201ENST00000238379 INSM1Q01101 510 aaPredicted RBP14.05□□□□□ -0.16
HDHD3-201ENST00000238379 RAPSNQ13702 412 aa14.05□□□□□ -0.16
HDHD3-201ENST00000238379 KEAP1Q14145 624 aa14.05□□□□□ -0.16
HDHD3-201ENST00000238379 PARP8Q8N3A8 854 aa14.05□□□□□ -0.16
HDHD3-201ENST00000238379 OR4C3Q8NH37 302 aa14.05□□□□□ -0.16
HDHD3-201ENST00000238379 PITX2Q99697 317 aa14.05□□□□□ -0.16
HDHD3-201ENST00000238379 CDC6Q99741 560 aa14.05□□□□□ -0.16
HDHD3-201ENST00000238379 ARMC7Q9H6L4 198 aa14.05□□□□□ -0.16
HDHD3-201ENST00000238379 ZNF556Q9HAH1 456 aa14.05□□□□□ -0.16
HDHD3-201ENST00000238379 AKAP7Q9P0M2 348 aaPredicted RBP14.05□□□□□ -0.16
HDHD3-201ENST00000238379 COPS7AQ9UBW8 275 aa14.05□□□□□ -0.16
HDHD3-201ENST00000238379 MGAT4BQ9UQ53 548 aa14.05□□□□□ -0.16
HDHD3-201ENST00000238379 OR10H3O60404 316 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 RFPL3O75679 317 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 ADAP00813 363 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 KLK3P07288 261 aaPredicted RBP14.04□□□□□ -0.16
HDHD3-201ENST00000238379 GKN3PP0CG01 181 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 ITIH1P19827 911 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 SLC5A2P31639 672 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 RYKP34925 604 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 RPS6KA3P51812 740 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 DCAF7P61962 342 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 RPP38P78345 283 aaKnown RBP14.04□□□□□ -0.16
HDHD3-201ENST00000238379 LSM11P83369 360 aaKnown RBP eCLIP14.04□□□□□ -0.16
HDHD3-201ENST00000238379 ST3GAL3Q11203 375 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 TCF15Q12870 199 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 CSRP2Q16527 193 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 DECR1Q16698 335 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 PGBD2Q6P3X8 592 aa14.04□□□□□ -0.16
HDHD3-201ENST00000238379 FAM199XQ6PEV8 388 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms