RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 ACER3Q9NUN7 267 aa17.16■□□□□ 0.34
SNX17-201ENST00000233575 PPIEQ9UNP9 301 aaKnown RBP17.16■□□□□ 0.34
SNX17-201ENST00000233575 NTNG1Q9Y2I2 539 aa17.16■□□□□ 0.34
SNX17-201ENST00000233575 FAM32AQ9Y421 112 aaKnown RBP17.16■□□□□ 0.34
SNX17-201ENST00000233575 HS3ST3B1Q9Y662 390 aa17.16■□□□□ 0.34
SNX17-201ENST00000233575 TTC36A6NLP5 189 aa17.15■□□□□ 0.34
SNX17-201ENST00000233575 NPIPB9F8W1W9 429 aa17.15■□□□□ 0.34
SNX17-201ENST00000233575 TNFRSF11BO00300 401 aa17.15■□□□□ 0.34
SNX17-201ENST00000233575 ADAMDEC1O15204 470 aa17.15■□□□□ 0.34
SNX17-201ENST00000233575 ALPLP05186 524 aa17.15■□□□□ 0.34
SNX17-201ENST00000233575 NID1P14543 1247 aa17.15■□□□□ 0.34
SNX17-201ENST00000233575 FPR1P21462 350 aa17.15■□□□□ 0.34
SNX17-201ENST00000233575 SLC26A5P58743 744 aa17.15■□□□□ 0.34
SNX17-201ENST00000233575 PPP2R2BQ00005 443 aa17.15■□□□□ 0.34
SNX17-201ENST00000233575 DAG1Q14118 895 aa17.15■□□□□ 0.34
SNX17-201ENST00000233575 HLA-DQA1Q5Y7H0 255 aa17.15■□□□□ 0.34
SNX17-201ENST00000233575 PACRGLQ8N7B6 248 aa17.15■□□□□ 0.34
SNX17-201ENST00000233575 OR4C15Q8NGM1 316 aa17.15■□□□□ 0.34
SNX17-201ENST00000233575 G6PC3Q9BUM1 346 aa17.15■□□□□ 0.34
SNX17-201ENST00000233575 PDP1Q9P0J1 537 aaPredicted RBP17.15■□□□□ 0.34
SNX17-201ENST00000233575 C19orf25Q9UFG5 118 aaPredicted RBP17.15■□□□□ 0.34
SNX17-201ENST00000233575 KCND3Q9UK17 655 aa17.15■□□□□ 0.34
SNX17-201ENST00000233575 SLC13A4Q9UKG4 626 aa17.15■□□□□ 0.34
SNX17-201ENST00000233575 A4GNTQ9UNA3 340 aa17.15■□□□□ 0.34
SNX17-201ENST00000233575 ZNF232Q9UNY5 417 aa17.15■□□□□ 0.34
SNX17-201ENST00000233575 AHCTF1Q8WYP5 2266 aa17.15■□□□□ 0.34
SNX17-201ENST00000233575 LOC102723996A0A087X1L8 192 aa17.14■□□□□ 0.34
SNX17-201ENST00000233575 ACADSP16219 412 aa17.14■□□□□ 0.34
SNX17-201ENST00000233575 FOLR3P41439 243 aa17.14■□□□□ 0.34
SNX17-201ENST00000233575 PCOLCEQ15113 449 aa17.14■□□□□ 0.34
SNX17-201ENST00000233575 DECR1Q16698 335 aa17.14■□□□□ 0.34
SNX17-201ENST00000233575 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.14■□□□□ 0.34
SNX17-201ENST00000233575 EXOC3L2Q2M3D2 409 aa17.14■□□□□ 0.34
SNX17-201ENST00000233575 LIN52Q52LA3 116 aa17.14■□□□□ 0.34
SNX17-201ENST00000233575 WLSQ5T9L3 541 aa17.14■□□□□ 0.34
SNX17-201ENST00000233575 SDCCAG3Q96C92 435 aa17.14■□□□□ 0.34
SNX17-201ENST00000233575 NAF1Q96HR8 494 aaKnown RBP17.14■□□□□ 0.34
SNX17-201ENST00000233575 EPYCQ99645 322 aa17.14■□□□□ 0.34
SNX17-201ENST00000233575 OSBPL10Q9BXB5 764 aa17.14■□□□□ 0.34
SNX17-201ENST00000233575 NMNAT1Q9HAN9 279 aaPredicted RBP17.14■□□□□ 0.34
SNX17-201ENST00000233575 CEP250Q9BV73 2442 aa17.14■□□□□ 0.33
SNX17-201ENST00000233575 TRBV11-1A0A0K0K1C0 115 aa17.14■□□□□ 0.33
SNX17-201ENST00000233575 CDHR4A6H8M9 788 aa17.14■□□□□ 0.33
SNX17-201ENST00000233575 OR6C76A6NM76 312 aa17.14■□□□□ 0.33
SNX17-201ENST00000233575 PCDH17O14917 1159 aa17.14■□□□□ 0.33
SNX17-201ENST00000233575 ZNF354AO60765 605 aaPredicted RBP17.14■□□□□ 0.33
SNX17-201ENST00000233575 CYC1P08574 325 aa17.14■□□□□ 0.33
SNX17-201ENST00000233575 GKN3PP0CG01 181 aa17.14■□□□□ 0.33
SNX17-201ENST00000233575 PRG2P13727 222 aa17.14■□□□□ 0.33
SNX17-201ENST00000233575 NOVA1P51513 510 aaKnown RBP17.14■□□□□ 0.33
SNX17-201ENST00000233575 ALDH3A2P51648 485 aa17.14■□□□□ 0.33
SNX17-201ENST00000233575 NHLH1Q02575 133 aa17.14■□□□□ 0.33
SNX17-201ENST00000233575 HSDL2Q6YN16 418 aa17.14■□□□□ 0.33
SNX17-201ENST00000233575 HIPK1Q86Z02 1210 aa17.14■□□□□ 0.33
SNX17-201ENST00000233575 PHF10Q8WUB8 498 aaKnown RBP17.14■□□□□ 0.33
SNX17-201ENST00000233575 VMP1Q96GC9 406 aa17.14■□□□□ 0.33
SNX17-201ENST00000233575 TRIM45Q9H8W5 580 aaPredicted RBP17.14■□□□□ 0.33
SNX17-201ENST00000233575 CACYBPQ9HB71 228 aaKnown RBP17.14■□□□□ 0.33
SNX17-201ENST00000233575 ACAD8Q9UKU7 415 aa17.14■□□□□ 0.33
SNX17-201ENST00000233575 TCFL5Q9UL49 500 aa17.14■□□□□ 0.33
SNX17-201ENST00000233575 PCDHGA10Q9Y5H3 936 aa17.14■□□□□ 0.33
SNX17-201ENST00000233575 AP4B1Q9Y6B7 739 aa17.14■□□□□ 0.33
SNX17-201ENST00000233575 PTPRBP23467 1997 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 CELSR3Q9NYQ7 3312 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 IGHV1-45A0A0A0MS14 117 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 TMEM200CA6NKL6 621 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 MASP2O00187 686 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 SNAP29O95721 258 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 IL33O95760 270 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 CELA2AP08217 269 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 GUSBP08236 651 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 UQCRBP14927 111 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 F8A1P23610 371 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 LIMS1P48059 325 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 RGS8P57771 180 aaPredicted RBP17.13■□□□□ 0.33
SNX17-201ENST00000233575 DCAF7P61962 342 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 NHSL2Q5HYW2 709 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 KIRREL2Q6UWL6 708 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 ADOQ96SZ5 270 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 KLHL28Q9NXS3 571 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 TRBV4-1A0A0J9YWV2 114 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 H0YJX3 145 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 HS6ST1O60243 411 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 GADD45GO95257 159 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 COX6A1P12074 109 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 ZNF136P52737 540 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 ATP12AP54707 1039 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 ZNF141Q15928 474 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 ZIK1Q3SY52 487 aaPredicted RBP17.13■□□□□ 0.33
SNX17-201ENST00000233575 RNF220Q5VTB9 566 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 CYP4Z1Q86W10 505 aa17.13■□□□□ 0.33
SNX17-201ENST00000233575 CNOT9Q92600 299 aaKnown RBP17.13■□□□□ 0.33
SNX17-201ENST00000233575 TMEFF2Q9UIK5 374 aaPredicted RBP17.13■□□□□ 0.33
SNX17-201ENST00000233575 ASPMQ8IZT6 3477 aa17.12■□□□□ 0.33
SNX17-201ENST00000233575 CPSF4LA6NMK7 179 aaKnown RBP17.12■□□□□ 0.33
SNX17-201ENST00000233575 TO15178 435 aa17.12■□□□□ 0.33
SNX17-201ENST00000233575 REM1O75628 298 aa17.12■□□□□ 0.33
SNX17-201ENST00000233575 CEACAM1P13688 526 aa17.12■□□□□ 0.33
SNX17-201ENST00000233575 ABCD3P28288 659 aa17.12■□□□□ 0.33
SNX17-201ENST00000233575 DAPP51397 102 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms