RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 SCP2D1Q9UJQ7 156 aa13.21□□□□□ -0.3
SF1-201ENST00000227503 POMT2Q9UKY4 750 aa13.21□□□□□ -0.3
SF1-201ENST00000227503 ZNF175Q9Y473 711 aa13.21□□□□□ -0.3
SF1-201ENST00000227503 A0A1W2PRU2 124 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 TMEM129A0AVI4 362 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 WASH3PC4AMC7 463 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 HLA-DPB1P04440 258 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 DRD2P14416 443 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 ZNF630Q2M218 657 aaPredicted RBP13.2□□□□□ -0.3
SF1-201ENST00000227503 RGS7BPQ6MZT1 257 aaPredicted RBP13.2□□□□□ -0.3
SF1-201ENST00000227503 SLC30A6Q6NXT4 461 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 FAAP20Q6NZ36 180 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 SLCO4C1Q6ZQN7 724 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 COMMD6Q7Z4G1 85 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 TRAM1L1Q8N609 369 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 RASGEF1AQ8N9B8 481 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 BOLLQ8N9W6 283 aaKnown RBP13.2□□□□□ -0.3
SF1-201ENST00000227503 SLC38A2Q96QD8 506 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 DPH7Q9BTV6 452 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 TMEM168Q9H0V1 697 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 OR10A4Q9H209 315 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 TMEM38AQ9H6F2 299 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 C11orf49Q9H6J7 331 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 CYB5R1Q9UHQ9 305 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 CCL26Q9Y258 94 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 DENND4CQ5VZ89 1909 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 SLC5A10A0PJK1 596 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 ANHXE9PGG2 379 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 FRS3O43559 492 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 IFNA14P01570 189 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 SPTBP11277 2137 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 VEGFCP49767 419 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 IKZF1Q13422 519 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 SYTL3Q4VX76 610 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 REEP3Q6NUK4 255 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 NHLRC1Q6VVB1 395 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 ZNF485Q8NCK3 441 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 BBS10Q8TAM1 723 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 NEIL2Q969S2 332 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 TMEM159Q96B96 161 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 UQCC2Q9BRT2 126 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 TTTY10Q9BZA0 68 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 BHLHE41Q9C0J9 482 aaPredicted RBP13.2□□□□□ -0.3
SF1-201ENST00000227503 KCNK12Q9HB15 430 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 NUBP2Q9Y5Y2 271 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 MYOFQ9NZM1 2061 aa13.2□□□□□ -0.3
SF1-201ENST00000227503 A0A1W2PRB8 838 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 SLC9B1P1A6NJY1 282 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 ANXA2P2A6NMY6 339 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 FAAHO00519 579 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 GMDSO60547 372 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 SLC19A2O60779 497 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 PLXNA2O75051 1894 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 SOX30O94993 753 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 TFP02787 698 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 KLK1P06870 262 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 XPAP23025 273 aaPredicted RBP13.19□□□□□ -0.3
SF1-201ENST00000227503 CDH11P55287 796 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 DEFA5Q01523 94 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 TAP2Q03519 686 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 BAMBIQ13145 260 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 TRMT10AQ8TBZ6 339 aaKnown RBP13.19□□□□□ -0.3
SF1-201ENST00000227503 C12orf57Q99622 126 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 LDAHQ9H6V9 325 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 TDP1Q9NUW8 608 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 MAFFQ9ULX9 164 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 SESN1Q9Y6P5 492 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 L7N2F9 121 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 PRODHO43272 600 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 CATP04040 527 aaKnown RBP13.19□□□□□ -0.3
SF1-201ENST00000227503 FURINP09958 794 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 DSG2Q14126 1118 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 OR5M10Q6IEU7 315 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 PAQR7Q86WK9 346 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 OR13C5Q8NGS8 318 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 ATOH1Q92858 354 aaPredicted RBP13.19□□□□□ -0.3
SF1-201ENST00000227503 KLK6Q92876 244 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 YIPF5Q969M3 257 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 TIFAQ96CG3 184 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 CXorf40BQ96DE9 158 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 FCRL4Q96PJ5 515 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 SLC6A16Q9GZN6 736 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 ZNF304Q9HCX3 659 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 GULP1Q9UBP9 304 aa13.19□□□□□ -0.3
SF1-201ENST00000227503 TGM5O43548 720 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 LILRB3O75022 631 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 FZD7O75084 574 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 KLHL18O94889 574 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 EGFP01133 1207 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 SRPRAP08240 638 aaKnown RBP13.18□□□□□ -0.3
SF1-201ENST00000227503 SNRPBP14678 240 aaKnown RBP13.18□□□□□ -0.3
SF1-201ENST00000227503 TIMP2P16035 220 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 PDHA2P29803 388 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 ACSL1P33121 698 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 THBS2P35442 1172 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 RAB40BQ12829 278 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 HSPB3Q12988 150 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 ELOAQ14241 798 aaKnown RBP13.18□□□□□ -0.3
SF1-201ENST00000227503 ZNF169Q14929 603 aaPredicted RBP13.18□□□□□ -0.3
SF1-201ENST00000227503 MED27Q6P2C8 311 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms