RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 MAGEA10P43363 369 aaPredicted RBP20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 GPR4P46093 362 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 ZNF136P52737 540 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 MXD1Q05195 221 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 ASAH1Q13510 395 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 DEFB134Q4QY38 66 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 UBQLNLQ8IYU4 475 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 ZCCHC10Q8TBK6 192 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 TMEM203Q969S6 136 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 MIXL1Q9H2W2 232 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 FN3KQ9H479 309 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 DUSP22Q9NRW4 184 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 FBXL21Q9UKT6 434 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 SLC7A7Q9UM01 511 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 CLCA2Q9UQC9 943 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 ENTPD2Q9Y5L3 495 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 UNC119BA6NIH7 251 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 P2RX6O15547 441 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 CTSVO60911 334 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 HLA-DPB1P04440 258 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 OR2B6P58173 313 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 YPEL5P62699 121 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 SIM1P81133 766 aaPredicted RBP20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 HOXC5Q00444 222 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 BDH1Q02338 343 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 KCNJ8Q15842 424 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 RPL13AP3Q6NVV1 102 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 FAM131AQ6UXB0 335 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 ZNF655Q8N720 491 aaPredicted RBP20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 CDRT4Q8N9R6 151 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 TMEM255BQ8WV15 326 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 KATNB1Q9BVA0 655 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 POLE3Q9NRF9 147 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 NTNG1Q9Y2I2 539 aa20.48■□□□□ 0.87
SMARCD2-201ENST00000225742 A0A1W2PQL4 384 aaPredicted RBP20.47■□□□□ 0.87
SMARCD2-201ENST00000225742 FAM221BA6H8Z2 402 aa20.47■□□□□ 0.87
SMARCD2-201ENST00000225742 PLOD3O60568 738 aa20.47■□□□□ 0.87
SMARCD2-201ENST00000225742 SOX30O94993 753 aa20.47■□□□□ 0.87
SMARCD2-201ENST00000225742 ATP1B1P05026 303 aa20.47■□□□□ 0.87
SMARCD2-201ENST00000225742 CLEC2LP0C7M8 214 aa20.47■□□□□ 0.87
SMARCD2-201ENST00000225742 HNRNPA2B1P22626 353 aaKnown RBP20.47■□□□□ 0.87
SMARCD2-201ENST00000225742 PTBP1P26599 531 aaKnown RBP eCLIP20.47■□□□□ 0.87
SMARCD2-201ENST00000225742 PPP3R1P63098 170 aa20.47■□□□□ 0.87
SMARCD2-201ENST00000225742 FABP5Q01469 135 aa20.47■□□□□ 0.87
SMARCD2-201ENST00000225742 C9orf50Q5SZB4 431 aa20.47■□□□□ 0.87
SMARCD2-201ENST00000225742 RD3Q7Z3Z2 195 aa20.47■□□□□ 0.87
SMARCD2-201ENST00000225742 CELF2-AS1Q8N7Q2 184 aa20.47■□□□□ 0.87
SMARCD2-201ENST00000225742 RERGQ96A58 199 aaPredicted RBP20.47■□□□□ 0.87
SMARCD2-201ENST00000225742 BMFQ96LC9 184 aa20.47■□□□□ 0.87
SMARCD2-201ENST00000225742 TOR4AQ9NXH8 423 aa20.47■□□□□ 0.87
SMARCD2-201ENST00000225742 ZNF223Q9UK11 482 aaPredicted RBP20.47■□□□□ 0.87
SMARCD2-201ENST00000225742 CBLCQ9ULV8 474 aa20.47■□□□□ 0.87
SMARCD2-201ENST00000225742 TICRRQ7Z2Z1 1910 aa20.47■□□□□ 0.87
SMARCD2-201ENST00000225742 FABP12A6NFH5 140 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 PIP5K1CO60331 668 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 APOL3O95236 402 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 CFL1P23528 166 aaKnown RBP20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 GPR50Q13585 617 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 METAP1DQ6UB28 335 aaPredicted RBP20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 RAB43Q86YS6 212 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 TSACCQ96A04 125 aaPredicted RBP20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 DIRAS2Q96HU8 199 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 ZFYVE21Q9BQ24 234 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 PRSS27Q9BQR3 290 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 HOXD1Q9GZZ0 328 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 POLHQ9Y253 713 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 TMEM5Q9Y2B1 443 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 LINC01565O15544 149 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 RASGRP1O95267 797 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 NID1P14543 1247 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 SRP54P61011 504 aaKnown RBP20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 ZNF155Q12901 538 aaPredicted RBP20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 BAK1Q16611 211 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 DCST2Q5T1A1 773 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 DGLUCYQ7Z3D6 616 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 NRARPQ7Z6K4 114 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 LHFPL3Q86UP9 236 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 OR52L1Q8NGH7 329 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 SAMD8Q96LT4 415 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 ZNF649Q9BS31 505 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 SLC22A4Q9H015 551 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 TMEM168Q9H0V1 697 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 UBQLN3Q9H347 655 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 IL21RQ9HBE5 538 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 TNFRSF10DQ9UBN6 386 aa20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 YARS2Q9Y2Z4 477 aaKnown RBP20.46■□□□□ 0.87
SMARCD2-201ENST00000225742 NTN1O95631 604 aa20.45■□□□□ 0.86
SMARCD2-201ENST00000225742 CH25HO95992 272 aa20.45■□□□□ 0.86
SMARCD2-201ENST00000225742 EGFP01133 1207 aa20.45■□□□□ 0.86
SMARCD2-201ENST00000225742 SOX18P35713 384 aa20.45■□□□□ 0.86
SMARCD2-201ENST00000225742 RPS5P46782 204 aaKnown RBP20.45■□□□□ 0.86
SMARCD2-201ENST00000225742 RFX2P48378 723 aa20.45■□□□□ 0.86
SMARCD2-201ENST00000225742 GPR68Q15743 365 aa20.45■□□□□ 0.86
SMARCD2-201ENST00000225742 PDZK1Q5T2W1 519 aa20.45■□□□□ 0.86
SMARCD2-201ENST00000225742 CXXC5Q7LFL8 322 aaKnown RBP20.45■□□□□ 0.86
SMARCD2-201ENST00000225742 TRIM48Q8IWZ4 208 aa20.45■□□□□ 0.86
SMARCD2-201ENST00000225742 OR4N5Q8IXE1 308 aa20.45■□□□□ 0.86
SMARCD2-201ENST00000225742 GALNT12Q8IXK2 581 aa20.45■□□□□ 0.86
SMARCD2-201ENST00000225742 ARIH2OSQ8N7S6 290 aa20.45■□□□□ 0.86
SMARCD2-201ENST00000225742 OR4F15Q8NGB8 312 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms