RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 MAPK11Q15759 364 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 SYPL1Q16563 259 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 HMGN2P46Q86SG4 172 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 MTDHQ86UE4 582 aaKnown RBP13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 C10orf111Q8N326 155 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 ANKFN1Q8N957 763 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 PRR7Q8TB68 274 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 ZG16BQ96DA0 208 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 KLHDC3Q9BQ90 382 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 G6PC3Q9BUM1 346 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 TRIM8Q9BZR9 551 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 UBQLN3Q9H347 655 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 IKZF5Q9H5V7 419 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 UBQLN4Q9NRR5 601 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 PLSCR2Q9NRY7 297 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 MED11Q9P086 117 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 TNFRSF10DQ9UBN6 386 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 MKLN1Q9UL63 735 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 C15orf41Q9Y2V0 281 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 NDUFAF1Q9Y375 327 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 FASNP49327 2511 aaKnown RBP13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 HELZ2Q9BYK8 2649 aaKnown RBP13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 ESPL1Q14674 2120 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 GCN1Q92616 2671 aaKnown RBP13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 TENM4Q6N022 2769 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 CENPVL1A0A0U1RR11 272 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 ACOT7O00154 380 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 TRAPPC6AO75865 159 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 SOX30O94993 753 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 KRT75O95678 551 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 ANGPTL1O95841 491 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 CRATP43155 626 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 KHKP50053 298 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 GPR68Q15743 365 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 KLHL26Q53HC5 615 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 EIPR1Q53HC9 387 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 BNC2Q6ZN30 1099 aaPredicted RBP13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 C16orf62Q7Z3J2 963 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 PIGWQ7Z7B1 504 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 PLCZ1Q86YW0 608 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 SPPL2CQ8IUH8 684 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 TSPEARQ8WU66 669 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 ROPN1LQ96C74 230 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 SLC6A15Q9H2J7 730 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 DSN1Q9H410 356 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 EXD2Q9NVH0 621 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 LEF1Q9UJU2 399 aaPredicted RBP13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 ABCG2Q9UNQ0 655 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 OSGIN2Q9Y236 505 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 GTF3C1Q12789 2109 aa13.12□□□□□ -0.31
SUPT4H1-201ENST00000225504 UBR5O95071 2799 aaPredicted RBP13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 ALG1L2C9J202 215 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 OIP5O43482 229 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 GMFGO60234 142 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 IGHG3P01860 377 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 NGFRP08138 427 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 NUDT7P0C024 238 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 ATP6V1C1P21283 382 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 CHRNEQ04844 493 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 SRSF1Q07955 248 aaKnown RBP eCLIP13.11□□□□□ -0.316e-8■□□□□ 8.2
SUPT4H1-201ENST00000225504 TOMM20Q15388 145 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 RGNQ15493 299 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 CD226Q15762 336 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 MAPK14Q16539 360 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 FLYWCH1Q4VC44 716 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 WIPI1Q5MNZ9 446 aaPredicted RBP13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 ATAD3BQ5T9A4 648 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 TRILQ7L0X0 811 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 YRDCQ86U90 279 aaKnown RBP13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 SNX32Q86XE0 403 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 TREML1Q86YW5 311 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 GHDCQ8N2G8 530 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 DPP10Q8N608 796 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 OR2M3Q8NG83 312 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 CCDC106Q9BWC9 280 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 TBL1XR1Q9BZK7 514 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 PPP4R1LQ9P1A2 415 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 POLEQ07864 2286 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 RELNP78509 3460 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 DNAJC13O75165 2243 aa13.11□□□□□ -0.31
SUPT4H1-201ENST00000225504 ANGPT2O15123 496 aa13.1□□□□□ -0.31
SUPT4H1-201ENST00000225504 NDUFB5O43674 189 aa13.1□□□□□ -0.31
SUPT4H1-201ENST00000225504 ZIC3O60481 467 aa13.1□□□□□ -0.31
SUPT4H1-201ENST00000225504 STX11O75558 287 aa13.1□□□□□ -0.31
SUPT4H1-201ENST00000225504 CBR3O75828 277 aa13.1□□□□□ -0.31
SUPT4H1-201ENST00000225504 H6PDO95479 791 aa13.1□□□□□ -0.31
SUPT4H1-201ENST00000225504 AGR2O95994 175 aa13.1□□□□□ -0.31
SUPT4H1-201ENST00000225504 HPNP05981 417 aa13.1□□□□□ -0.31
SUPT4H1-201ENST00000225504 CHRM4P08173 479 aa13.1□□□□□ -0.31
SUPT4H1-201ENST00000225504 ENDOUP21128 410 aaKnown RBP13.1□□□□□ -0.31
SUPT4H1-201ENST00000225504 TCEA1P23193 301 aaKnown RBP13.1□□□□□ -0.31
SUPT4H1-201ENST00000225504 ELAVL4P26378 380 aaKnown RBP13.1□□□□□ -0.31
SUPT4H1-201ENST00000225504 LCN1P31025 176 aa13.1□□□□□ -0.31
SUPT4H1-201ENST00000225504 DCTP40126 519 aa13.1□□□□□ -0.31
SUPT4H1-201ENST00000225504 CLK3P49761 638 aaKnown RBP13.1□□□□□ -0.31
SUPT4H1-201ENST00000225504 ATP12AP54707 1039 aa13.1□□□□□ -0.31
SUPT4H1-201ENST00000225504 ELOAQ14241 798 aaKnown RBP13.1□□□□□ -0.31
SUPT4H1-201ENST00000225504 CAPRIN1Q14444 709 aaKnown RBP13.1□□□□□ -0.31
SUPT4H1-201ENST00000225504 NDUFAF6Q330K2 333 aa13.1□□□□□ -0.31
SUPT4H1-201ENST00000225504 GPAT3Q53EU6 434 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms