RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 CATSPER1Q8NEC5 780 aa25.01■■□□□ 1.59
CHMP4B-201ENST00000217402 SPPL2AQ8TCT8 520 aa25.01■■□□□ 1.59
CHMP4B-201ENST00000217402 TM9SF4Q92544 642 aa25.01■■□□□ 1.59
CHMP4B-201ENST00000217402 FIG4Q92562 907 aa25.01■■□□□ 1.59
CHMP4B-201ENST00000217402 TTC9Q92623 222 aa25.01■■□□□ 1.59
CHMP4B-201ENST00000217402 CCDC124Q96CT7 223 aaKnown RBP25.01■■□□□ 1.59
CHMP4B-201ENST00000217402 BCL2L10Q9HD36 194 aa25.01■■□□□ 1.59
CHMP4B-201ENST00000217402 UBQLN4Q9NRR5 601 aa25.01■■□□□ 1.59
CHMP4B-201ENST00000217402 KCNE5Q9UJ90 142 aa25.01■■□□□ 1.59
CHMP4B-201ENST00000217402 ZNF451Q9Y4E5 1061 aa25.01■■□□□ 1.59
CHMP4B-201ENST00000217402 PCDHGA10Q9Y5H3 936 aa25.01■■□□□ 1.59
CHMP4B-201ENST00000217402 SLC25A12O75746 678 aa25■■□□□ 1.59
CHMP4B-201ENST00000217402 NCK1P16333 377 aa25■■□□□ 1.59
CHMP4B-201ENST00000217402 EVI2BP34910 448 aa25■■□□□ 1.59
CHMP4B-201ENST00000217402 VEZF1Q14119 521 aa25■■□□□ 1.59
CHMP4B-201ENST00000217402 PRAMEF8Q5VWM4 474 aa25■■□□□ 1.59
CHMP4B-201ENST00000217402 PRAMEF7Q5VXH5 474 aa25■■□□□ 1.59
CHMP4B-201ENST00000217402 ASRGL1Q7L266 308 aa25■■□□□ 1.59
CHMP4B-201ENST00000217402 GOLM1Q8NBJ4 401 aa25■■□□□ 1.59
CHMP4B-201ENST00000217402 TNIP2Q8NFZ5 429 aa25■■□□□ 1.59
CHMP4B-201ENST00000217402 METTL7AQ9H8H3 244 aa25■■□□□ 1.59
CHMP4B-201ENST00000217402 MTHFD2LQ9H903 347 aaPredicted RBP25■■□□□ 1.59
CHMP4B-201ENST00000217402 TNRC6AQ8NDV7 1962 aaKnown RBP25■■□□□ 1.59
CHMP4B-201ENST00000217402 UGT2B17O75795 530 aa24.99■■□□□ 1.59
CHMP4B-201ENST00000217402 OXSR1O95747 527 aaPredicted RBP24.99■■□□□ 1.59
CHMP4B-201ENST00000217402 GUSBP08236 651 aa24.99■■□□□ 1.59
CHMP4B-201ENST00000217402 HPGDP15428 266 aa24.99■■□□□ 1.59
CHMP4B-201ENST00000217402 HTR1EP28566 365 aa24.99■■□□□ 1.59
CHMP4B-201ENST00000217402 LCN1P31025 176 aa24.99■■□□□ 1.59
CHMP4B-201ENST00000217402 ATP12AP54707 1039 aa24.99■■□□□ 1.59
CHMP4B-201ENST00000217402 MAPK14Q16539 360 aa24.99■■□□□ 1.59
CHMP4B-201ENST00000217402 SPATS1Q496A3 300 aa24.99■■□□□ 1.59
CHMP4B-201ENST00000217402 PDZK1Q5T2W1 519 aa24.99■■□□□ 1.59
CHMP4B-201ENST00000217402 INTS11Q5TA45 600 aaKnown RBP24.99■■□□□ 1.59
CHMP4B-201ENST00000217402 ZADH2Q8N4Q0 377 aa24.99■■□□□ 1.59
CHMP4B-201ENST00000217402 PSD4Q8NDX1 1056 aa24.99■■□□□ 1.59
CHMP4B-201ENST00000217402 GRHL3Q8TE85 626 aa24.99■■□□□ 1.59
CHMP4B-201ENST00000217402 PAQR8Q8TEZ7 354 aa24.99■■□□□ 1.59
CHMP4B-201ENST00000217402 HES7Q9BYE0 225 aa24.99■■□□□ 1.59
CHMP4B-201ENST00000217402 PCDHAC1Q9H158 963 aa24.99■■□□□ 1.59
CHMP4B-201ENST00000217402 SH2D2AQ9NP31 389 aa24.99■■□□□ 1.59
CHMP4B-201ENST00000217402 TIMMDC1Q9NPL8 285 aa24.99■■□□□ 1.59
CHMP4B-201ENST00000217402 KLRF1Q9NZS2 232 aa24.99■■□□□ 1.59
CHMP4B-201ENST00000217402 PRAMEF25A6NGN4 478 aa24.98■■□□□ 1.59
CHMP4B-201ENST00000217402 NPIPB9F8W1W9 429 aa24.98■■□□□ 1.59
CHMP4B-201ENST00000217402 G3V3Y1 287 aa24.98■■□□□ 1.59
CHMP4B-201ENST00000217402 CXCR6O00574 342 aa24.98■■□□□ 1.59
CHMP4B-201ENST00000217402 SCDO00767 359 aa24.98■■□□□ 1.59
CHMP4B-201ENST00000217402 SCO2O43819 266 aa24.98■■□□□ 1.59
CHMP4B-201ENST00000217402 GCM2O75603 506 aaPredicted RBP24.98■■□□□ 1.59
CHMP4B-201ENST00000217402 TBXA2RP21731 343 aa24.98■■□□□ 1.59
CHMP4B-201ENST00000217402 ME2P23368 584 aa24.98■■□□□ 1.59
CHMP4B-201ENST00000217402 PCBP3P57721 371 aaKnown RBP24.98■■□□□ 1.59
CHMP4B-201ENST00000217402 RPP38P78345 283 aaKnown RBP24.98■■□□□ 1.59
CHMP4B-201ENST00000217402 RHDQ02161 417 aa24.98■■□□□ 1.59
CHMP4B-201ENST00000217402 SLC22A10Q63ZE4 541 aa24.98■■□□□ 1.59
CHMP4B-201ENST00000217402 KRT73Q86Y46 540 aa24.98■■□□□ 1.59
CHMP4B-201ENST00000217402 ULK2Q8IYT8 1036 aa24.98■■□□□ 1.59
CHMP4B-201ENST00000217402 FBXW8Q8N3Y1 598 aa24.98■■□□□ 1.59
CHMP4B-201ENST00000217402 MDS2Q8NDY4 140 aa24.98■■□□□ 1.59
CHMP4B-201ENST00000217402 TBL1XR1Q9BZK7 514 aa24.98■■□□□ 1.59
CHMP4B-201ENST00000217402 HOXD1Q9GZZ0 328 aa24.98■■□□□ 1.59
CHMP4B-201ENST00000217402 ZNF71Q9NQZ8 489 aaPredicted RBP24.98■■□□□ 1.59
CHMP4B-201ENST00000217402 KLHL1Q9NR64 748 aa24.98■■□□□ 1.59
CHMP4B-201ENST00000217402 CDK2AP1O14519 115 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 OPN1SWP03999 348 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 GGT1P19440 569 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 TNFSF10P50591 281 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 LRRC23Q53EV4 343 aaPredicted RBP24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 IGFL3Q6UXB1 125 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 APOOLQ6UXV4 268 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 PEX5LQ8IYB4 626 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 GATSQ8NAP1 163 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 ZNF527Q8NB42 609 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 POGLUT1Q8NBL1 392 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 C9orf43Q8TAL5 461 aaPredicted RBP24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 ZNF607Q96SK3 696 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 GALNT9Q9HCQ5 603 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 CNOT11Q9UKZ1 510 aaKnown RBP24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 PCDHGB7Q9Y5F8 929 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 CNTRLQ7Z7A1 2325 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 AGAP5A6NIR3 686 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 FADS1O60427 444 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 P04436 131 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 CASP3P42574 277 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 ASB18Q6ZVZ8 466 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 MARCH3Q86UD3 253 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 OR52P1PQ8NH57 321 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 C5orf34Q96MH7 638 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 SECISBP2Q96T21 854 aaKnown RBP24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 CACYBPQ9HB71 228 aaKnown RBP24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 SACM1LQ9NTJ5 587 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 CNIH4Q9P003 139 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 ABCG2Q9UNQ0 655 aa24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 GPC6Q9Y625 555 aaPredicted RBP24.97■■□□□ 1.59
CHMP4B-201ENST00000217402 NGFRP08138 427 aa24.96■■□□□ 1.59
CHMP4B-201ENST00000217402 ETS2P15036 469 aa24.96■■□□□ 1.59
CHMP4B-201ENST00000217402 ZNF141Q15928 474 aa24.96■■□□□ 1.59
CHMP4B-201ENST00000217402 AP1ARQ63HQ0 302 aa24.96■■□□□ 1.59
CHMP4B-201ENST00000217402 PGM2L1Q6PCE3 622 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms