RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 C17orf105B2RV13 164 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 ALDOCP09972 364 aaKnown RBP12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 ARAFP10398 606 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 CLDN12P56749 244 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 OR2G6Q5TZ20 316 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 FAM219BQ5XKK7 198 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 GRHL2Q6ISB3 625 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 GSG1LQ6UXU4 331 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 HACD2Q6Y1H2 254 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 GPR137CQ8N3F9 429 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 SLC22A31A6NKX4 558 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 LATS1O95835 1130 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 RNH1P13489 461 aaKnown RBP12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 AKR1C2P52895 323 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 STK11Q15831 433 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 GPR139Q6DWJ6 353 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 TMEM205Q6UW68 189 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 KCTD20Q7Z5Y7 419 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 RCBTB1Q8NDN9 531 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 OR4C15Q8NGM1 316 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 ELMOD3Q96FG2 381 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 RDH14Q9HBH5 336 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 NUP188Q5SRE5 1749 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 LYRM1O43325 122 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 DUX1O43812 170 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 XCR1P46094 333 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 SELENOWP63302 87 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 HSD11B2P80365 405 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 ZNF750Q32MQ0 723 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 EIF5AL1Q6IS14 154 aaKnown RBP12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 PNCKQ6P2M8 343 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 TBPL2Q6SJ96 375 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 DNAJC5GQ8N7S2 189 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 PAPD5Q8NDF8 572 aaKnown RBP12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 SENP5Q96HI0 755 aaPredicted RBP12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 SLC6A17Q9H1V8 727 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 KDM4EB2RXH2 506 aaPredicted RBP12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 PABPC4LP0CB38 370 aaKnown RBP12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 DCKP27707 260 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 HMGCLP35914 325 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 MCCD1P59942 119 aaPredicted RBP12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 TLE3Q04726 772 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 PRAMEF8Q5VWM4 474 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 PRAMEF7Q5VXH5 474 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 ARHGAP11AQ6P4F7 1023 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 ACBD4Q8NC06 268 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 ARSGQ96EG1 525 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 MAGIXQ9H6Y5 334 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 NAALAD2Q9Y3Q0 740 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 PIAS3Q9Y6X2 628 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 CHD2O14647 1828 aaKnown RBP12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 OR8U9P0C7N5 309 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 CCR7P32248 378 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 RORAP35398 523 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 SPOCK1Q08629 439 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 PAQR8Q8TEZ7 354 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 HSD17B8Q92506 261 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 RPL3LQ92901 407 aaKnown RBP12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 KLHL21Q9UJP4 597 aa12.84□□□□□ -0.35
TGFBR3-201ENST00000212355 VEGFDO43915 354 aa12.83□□□□□ -0.35
TGFBR3-201ENST00000212355 IFNA5P01569 189 aa12.83□□□□□ -0.35
TGFBR3-201ENST00000212355 CA3P07451 260 aa12.83□□□□□ -0.35
TGFBR3-201ENST00000212355 PGCP20142 388 aa12.83□□□□□ -0.35
TGFBR3-201ENST00000212355 CAV2P51636 162 aa12.83□□□□□ -0.35
TGFBR3-201ENST00000212355 S100A12P80511 92 aa12.83□□□□□ -0.35
TGFBR3-201ENST00000212355 FGL2Q14314 439 aa12.83□□□□□ -0.35
TGFBR3-201ENST00000212355 Q6ZSR6 202 aa12.83□□□□□ -0.35
TGFBR3-201ENST00000212355 TMEM185AQ8NFB2 350 aa12.83□□□□□ -0.35
TGFBR3-201ENST00000212355 TRUB1Q8WWH5 349 aaKnown RBP12.83□□□□□ -0.35
TGFBR3-201ENST00000212355 CPEB1Q9BZB8 566 aaKnown RBP12.83□□□□□ -0.35
TGFBR3-201ENST00000212355 F13BP05160 661 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 GM2AP17900 193 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 ACTA2P62736 377 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 ACTG2P63267 376 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 SYPL1Q16563 259 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 WDR45BQ5MNZ6 344 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 KIAA0319Q5VV43 1072 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 DNTTIP1Q9H147 329 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 ADAM12O43184 909 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 UPK1BO75841 260 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 B3GALT4O96024 378 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 LCATP04180 440 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 ELAVL3Q14576 367 aaKnown RBP12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 SSX2Q16385 188 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 PRSS48Q7RTY5 328 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 SPARTQ8N0X7 666 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 IL1F10Q8WWZ1 152 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 F8W036 122 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 DBHP09172 617 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 POLR2IP36954 125 aaKnown RBP12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 BLOC1S1P78537 153 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 LKAAEAR1Q8TD35 194 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 RTP3Q9BQQ7 232 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 COL14A1Q05707 1796 aaKnown RBP12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 BORCS7-ASMTA0A0B4J1R7 106 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 CRHBPP24387 322 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 LBX1P52954 281 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 ACTC1P68032 377 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 ACTA1P68133 377 aa12.83□□□□□ -0.36
TGFBR3-201ENST00000212355 EEF1A2Q05639 463 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms