RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Brinp2Q6DFY8 783 aa9.18□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 PrlhrQ6VMN6 370 aa9.18□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 PeloQ80X73 385 aa9.18□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Mrps7Q80X85 242 aaKnown RBP9.18□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Timm29Q8BGX2 266 aa9.18□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Pex5lQ8C437 567 aa9.18□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Faim2Q8K097 317 aa9.18□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Laptm4bQ91XQ6 227 aa9.18□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Dusp7Q91Z46 422 aa9.18□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Etv5Q9CXC9 510 aa9.18□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Ccdc107Q9DCC3 242 aa9.18□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Pop7Q9DCH2 140 aa9.18□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Nfkb2Q9WTK5 899 aa9.18□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 SpaarA0A1B0GSZ0 75 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Skint4A7TZF3 474 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Spata6lB2RV46 347 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Vmn2r110E9PWD5 858 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 S100a2J3QMC7 104 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Aldh3b3J3QMK6 479 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Vmn2r9K7N6Z8 848 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Gm7970L7N271 213 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Gm7980L7N471 213 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Scarb2O35114 478 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Tgfb3P17125 410 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Apoc3P33622 99 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 PdxpP60487 292 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Gal3st3P61315 431 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Tbx4P70325 552 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Serpine2Q07235 397 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Tmem38aQ3TMP8 298 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 CrhbpQ60571 322 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Elavl4Q61701 385 aaKnown RBP9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Olfr1045Q7TR80 315 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Efcab3Q80X60 432 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 QpctlQ8BH73 383 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Zbtb37Q8C3U9 504 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Scara5Q8K299 491 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Tmem268Q8R239 342 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Olfr161Q8VGB9 313 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Rpp25Q91WE3 199 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Mrgprb5Q91ZB9 322 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Alg5Q9DB25 324 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Gpr88Q9EPB7 384 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Slc9a3r2Q9JHL1 337 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Lpar2Q9JL06 348 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Phc2Q9QWH1 850 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Orc5Q9WUV0 435 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Map1bP14873 2464 aaKnown RBP9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Igkv10-94A0A075B5L1 115 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Gm42372A0A1B0GT27 204 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Adam34A2RSG8 714 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Tmem44E9Q4M0 433 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Vmn2r109K7N747 858 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 B3galt2O54905 422 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Nfkbil1O88995 381 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Cdk1P11440 297 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Cntn1P12960 1020 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Ctbp2P56546 445 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 TigitP86176 249 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 HgfQ08048 728 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Dcp1bQ3U564 578 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Zrsr1Q64707 428 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Adipor2Q8BQS5 386 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 ExogQ8C163 368 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Abhd4Q8VD66 342 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Nmrk2Q9D7C9 195 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Znf207Q9JMD0 495 aaKnown RBP9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 SpastQ9QYY8 614 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Tbl2Q9R099 442 aaKnown RBP9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Rad9aQ9Z0F6 389 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Mocs2Q9Z223 189 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Bdp1Q571C7 2467 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 TmppeD3Z286 447 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 AU018091E9PWS4 684 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Rnpepl1G5E872 720 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Vmn1r13G5E8I3 300 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Ube2fbQ3UWQ3 185 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Rnase12Q5GAM8 145 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 NnatQ61979 81 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Hs3st2Q673U1 367 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Q8BHG2 160 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Fam69cQ8BQT2 410 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Clcc1Q99LI2 539 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Lcn9Q9D267 178 aa9.17□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Olfr1032A2ATE5 310 aa9.16□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Adam3F8VQ03 822 aa9.16□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Bnip2O54940 326 aa9.16□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Klrg1O88713 188 aa9.16□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 P01679 107 aa9.16□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Hsd3b1P24815 373 aa9.16□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Htr7P32304 448 aa9.16□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Rab33aP97950 237 aa9.16□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Eri2Q5BKS4 688 aa9.16□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Ugt8Q64676 541 aa9.16□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Olfr1275Q7TQY8 312 aa9.16□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Fam109aQ8BH49 266 aa9.16□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Mblac2Q8BL86 279 aa9.16□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Cdkl3Q8BLF2 595 aa9.16□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Olfr63Q8VBW9 316 aa9.16□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Olfr202Q8VGQ3 307 aa9.16□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms