RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 AmbnO55189 407 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Cyp1a2P00186 513 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Foxa1P35582 468 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Pcbp3P57722 371 aaKnown RBP8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Polr2iP60898 125 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Ica1P97411 478 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 VwceQ3U515 929 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Acsm3Q3UNX5 580 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr140Q60878 302 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Prkd1Q62101 918 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Ttf1Q62187 859 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Zic2Q62520 530 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Carns1Q6ZPS2 827 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Krt75Q8BGZ7 551 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Peli2Q8BST6 419 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Cpne1Q8C166 536 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Tmem203Q8R235 136 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Dtx2Q8R3P2 619 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Q8R3Y5 413 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr729Q8VET4 323 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr849Q8VFF6 312 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr109Q8VG96 314 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Rfpl4aQ8VH31 287 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Oas3Q8VI93 1138 aaKnown RBP8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Shmt2Q9CZN7 504 aaKnown RBP8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Ttc25Q9D4B2 624 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Gm11214V9GX06 183 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Tulp3O88413 460 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Cyp4a10O88833 509 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Cox5bP19536 128 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Man2a1P27046 1150 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Mylk4Q5SUV5 386 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Art1Q60935 325 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Man1c1Q6NXK9 625 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Frg2f1Q6P3A2 227 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Ffar4Q7TMA4 361 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Znf516Q7TSH3 1157 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Mfsd11Q8BJ51 449 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 PgghgQ8BP56 690 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Kcnmb1Q8CAE3 191 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Fbxw17Q8CFE8 466 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 St8sia6Q8K4T1 398 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Cd177Q8R2S8 817 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr165Q8VFA2 313 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Nprl3Q8VIJ8 569 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Slco1a5Q91YY5 670 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Sucnr1Q99MT6 317 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Rps21Q9CQR2 83 aaKnown RBP8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Bex4Q9CWT2 118 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Hnrnpa0Q9CX86 305 aaKnown RBP8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 NarfQ9CYQ7 462 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Armc8Q9DBR3 673 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Sacm1lQ9EP69 587 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Raet1dQ9JI58 249 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Opn4Q9QXZ9 521 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Lrrk1Q3UHC2 2014 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Igkv12-38A0A0G2JEI7 115 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Tbc1d25A1A5B6 742 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Mpig6bD7PDD4 242 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Zfp945E9PYM8 794 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Ccrl2O35457 360 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Gstm2P15626 218 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Abcb1aP21447 1276 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Pcsk4P29121 655 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Il18r1Q61098 537 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Dsg1cQ7TSF0 911 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Vrk1Q80X41 440 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 MkxQ8BIA3 353 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 OacylQ8BML2 685 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Muc20Q8BUE7 656 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Ugt2a3Q8BWQ1 534 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Tmem252Q8C353 183 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 RybpQ8CCI5 228 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Lyrm4Q8K215 91 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 MepceQ8K3A9 666 aaKnown RBP8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Fndc5Q8K4Z2 209 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Slc38a4Q8R1S9 547 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Plet1Q8VEN2 237 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr781Q8VFZ8 311 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr61Q8VGM2 311 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr1233Q8VGN0 305 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 RabifQ91X96 123 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Pink1Q99MQ3 580 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Mmp1aQ9EPL5 464 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Mmp19Q9JHI0 527 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Nrip2Q9JHR9 270 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Trim3Q9R1R2 744 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Kcne3Q9WTW2 103 aa8.11□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr396-ps1A0A0U1RNF5 211 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Rhbdl2A2AGA4 302 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Znf382B2RXC5 579 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Stk16O88697 305 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 AcadvlP50544 656 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 ApodP51910 189 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Jak1P52332 1153 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Slc27a5Q4LDG0 689 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Cd34Q64314 382 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Wdr91Q7TMQ7 748 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Spaca9Q7TPM5 168 aa8.1□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr1308Q7TQX0 320 aa8.1□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms