RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Clec18aQ7TSQ1 534 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Slc7a6Q8BGK6 515 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Acot4Q8BWN8 421 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gykl1Q8C635 549 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ptcd2Q8R3K3 381 aaKnown RBP9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Oosp1Q925U0 202 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Eral1Q9CZU4 437 aaKnown RBP9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 NaaaQ9D7V9 362 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Aldh7a1Q9DBF1 539 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gdf2Q9WV56 428 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr239A0PK55 315 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr605E9Q838 314 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Zfp994J3QM38 661 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 1700014D04RikJ3QMS2 983 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr55K7N6Q1 315 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Slc30a4O35149 430 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gpr50O88495 591 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Pmp22P16646 161 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Hmga1P17095 107 aaKnown RBP9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cry1P97784 606 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 DtlQ3TLR7 729 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ffar3Q3UFD7 319 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Mfsd4aQ6PDC8 510 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Abhd13Q80UX8 337 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Prr5Q812A5 387 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Mgat4aQ812G0 535 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Lrrc39Q8BGI7 337 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 DpcdQ8BPA8 203 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Phf21bQ8C966 487 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Slc16a14Q8K1C7 512 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr666Q8VH00 318 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Camk1gQ91VB2 477 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 AjubaQ91XC0 547 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Rnf167Q91XF4 347 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Pcdhga12Q91XY7 932 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ppp6cQ9CQR6 305 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Wdr45bQ9CR39 344 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Bcl7aQ9CXE2 210 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 LhppQ9D7I5 270 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr705Q9EPF7 316 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Slco2a1Q9EPT5 643 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Zfp646Q6NV66 1788 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tmem233D3Z1U7 110 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Vmn2r110E9PWD5 858 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Fam170bE9PXT9 378 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Prdm13E9PZZ1 754 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 E2f3O35261 457 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Matn3O35701 481 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 AdaP03958 352 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cd28P31041 218 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Rpl19P84099 196 aaKnown RBP9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 JupQ02257 745 aaKnown RBP9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Sat2Q6P8J2 170 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ubtd2Q6PGH0 234 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cep68Q8C0D9 733 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Kctd11Q8K485 232 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Angptl8Q8R1L8 198 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Art4Q9CRA0 300 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Sapcd1Q9CY86 146 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Snx20Q9D2Y5 313 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Yipf5Q9EQQ2 257 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Dclre1aQ9JIC3 1026 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Adam28Q9JLN6 793 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Fbxo8Q9QZN3 319 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tmsb15aA2AEH9 79 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gm14085A2AWR5 660 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ttll2A4Q9E4 540 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Skint2A7XUX6 400 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gm6526G3X9Q9 198 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Alkal1J3QPP8 127 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Hsd3b6O35469 373 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 FhitO89106 150 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 HexaP29416 528 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gpr3P35413 330 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Arf5P84084 180 aaKnown RBP9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Vamp1Q62442 118 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Pou6f2Q8BJI4 691 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Fndc9Q8BJN4 226 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Derl2Q8BNI4 239 aaKnown RBP9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 BC024139Q8BVJ3 772 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Pithd1Q8BWR2 211 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Il17rdQ8JZL1 738 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Q8R2K8 148 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Plpp6Q9D4F2 292 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Clca3a2Q9EQR4 902 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Clca3a1Q9QX15 902 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Asic5Q9R0Y1 495 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Col4a5Q63ZW6 1691 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Zfp605E9QAH2 694 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Vmn2r75G5E8Z7 853 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cacng2O88602 323 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Syn1O88935 706 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 C9P06683 548 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ca3P16015 260 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Bdkrb2P32299 392 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 GcgP55095 180 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Them4Q3UUI3 230 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Stox2Q499E5 926 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Nox3Q672J9 568 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Hs3st2Q673U1 367 aa9.4□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms