RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 AcadmP45952 421 aaKnown RBP15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Usp30Q3UN04 517 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 MeikinQ5F2C3 434 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Olfr1344Q7TQV3 321 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Olfr871Q7TRF0 311 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Olfr309Q7TS01 308 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Rdh10Q8VCH7 341 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Olfr54Q8VFE6 313 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Asb18Q8VHA6 467 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Sfxn1Q99JR1 322 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Rwdd2bQ99M03 290 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Atp5f1Q9CQQ7 256 aaKnown RBP15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Trim13Q9CYB0 407 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Adam26aQ9R158 697 aa15.44■□□□□ 0.06
Shh-201ENSMUST00000002708 Cela3aA2A9U8 283 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Ddi2A2ADY9 399 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Gm8765B7ZWJ3 1017 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Vmn2r75G5E8Z7 853 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Sult3a2G5E904 293 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 CaskO70589 926 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 CyctP00015 105 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Tgfb1P04202 390 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Ctbp2P56546 445 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Sf3b6P59708 125 aaKnown RBP15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Rspo3Q2TJ95 277 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Gm906Q3V0M1 1017 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Taar2Q5QD17 339 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 ToxQ66JW3 526 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Rims3Q80U57 307 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Fam69cQ8BQT2 410 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 AgmoQ8BS35 447 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Poglut1Q8BYB9 392 aaKnown RBP15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Kiaa0513Q8R0A7 407 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Vmn1r83Q8R287 306 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Chrna3Q8R4G9 499 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Erlec1Q8VEH8 483 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Fam45aQ9D8N2 357 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Prkar1aQ9DBC7 381 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Grb14Q9JLM9 538 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Tbl2Q9R099 442 aaKnown RBP15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Ak4Q9WUR9 223 aaKnown RBP15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Tcrg-V3A0A0G2JEW2 117 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Slc23a4A0A0J9YUX7 615 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Olfr485A0A140LJF5 317 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Zfp993A2A8V4 313 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Slc22a28B2RT89 552 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Rnpepl1G5E872 720 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Vmn1r169L7N275 304 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Vmn2r102L7N279 857 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Cntn1P12960 1020 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Gdi1P50396 447 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Cct3P80318 545 aaKnown RBP15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Ankdd1bQ14DN9 521 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 PpcdcQ8BZB2 204 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Lysmd4Q8CC84 293 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Kiss1rQ91V45 396 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Akr1c21Q91WR5 323 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Mrgprb5Q91ZB9 322 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Slc22a30Q96LX3 552 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Ndufs4Q9CXZ1 175 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 ItpaQ9D892 198 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Nusap1Q9ERH4 427 aaKnown RBP15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 Jph3Q9ET77 744 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 ChmlQ9QZD5 621 aa15.43■□□□□ 0.06
Shh-201ENSMUST00000002708 A0A286YDM2 672 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Xlr5aA2BI45 236 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Tmem240B2RWJ3 173 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Gm21319F6YNI8 144 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Vmn1r20K7N778 303 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 EllO08856 602 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Wnt4P22724 351 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 CpeQ00493 476 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Zfp41Q02526 198 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Acss3Q14DH7 682 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Slc44a5Q5RJI2 710 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Nr2f1Q60632 422 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Rcbtb1Q6NXM2 531 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Fbxl21Q8BFZ4 434 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Tm9sf4Q8BH24 643 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Gm9881Q8BR56 211 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Adam4Q8CGQ2 763 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 AspaQ8R3P0 312 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Plet1Q8VEN2 237 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Ssr2Q9CPW5 183 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Timm22Q9CQ85 194 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Exo5Q9CXP9 373 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Plekhj1Q9D240 164 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Cypt12Q9DAR6 119 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Olfr938Q9EQ93 315 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Tmem37Q9JJV3 211 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 TomtA1Y9I9 258 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Chst13D3Z6E3 336 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Slc10a1O08705 362 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Prl7a1O54830 266 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Atp1b1P14094 304 aaKnown RBP15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Pmp22P16646 161 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Gm11492Q5ND19 536 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 SypQ62277 314 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Nox3Q672J9 568 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Chst9Q76EC5 413 aa15.42■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 41.1 ms