RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 LARS2Q15031 903 aaKnown RBP15.99■□□□□ 0.15
PHGDH-234ENST00000642041 MFSD12Q6NUT3 480 aa15.99■□□□□ 0.15
PHGDH-234ENST00000642041 PEX5LQ8IYB4 626 aa15.99■□□□□ 0.15
PHGDH-234ENST00000642041 SLC34A3Q8N130 599 aa15.99■□□□□ 0.15
PHGDH-234ENST00000642041 RCBTB1Q8NDN9 531 aa15.99■□□□□ 0.15
PHGDH-234ENST00000642041 CHDHQ8NE62 594 aaPredicted RBP15.99■□□□□ 0.15
PHGDH-234ENST00000642041 OR9A4Q8NGU2 314 aa15.99■□□□□ 0.15
PHGDH-234ENST00000642041 SLC35B4Q969S0 331 aa15.99■□□□□ 0.15
PHGDH-234ENST00000642041 TAMM41Q96BW9 452 aa15.99■□□□□ 0.15
PHGDH-234ENST00000642041 MMABQ96EY8 250 aaPredicted RBP15.99■□□□□ 0.15
PHGDH-234ENST00000642041 DGAT2Q96PD7 388 aa15.99■□□□□ 0.15
PHGDH-234ENST00000642041 PIP5K1AQ99755 562 aa15.99■□□□□ 0.15
PHGDH-234ENST00000642041 ANKRD19PQ9H560 264 aa15.99■□□□□ 0.15
PHGDH-234ENST00000642041 ZNF556Q9HAH1 456 aa15.99■□□□□ 0.15
PHGDH-234ENST00000642041 TMCC3Q9ULS5 477 aa15.99■□□□□ 0.15
PHGDH-234ENST00000642041 KCNMB2Q9Y691 235 aa15.99■□□□□ 0.15
PHGDH-234ENST00000642041 SGK494L7N484 410 aa15.98■□□□□ 0.15
PHGDH-234ENST00000642041 FOXS1O43638 330 aa15.98■□□□□ 0.15
PHGDH-234ENST00000642041 KIF1CO43896 1103 aaKnown RBP15.98■□□□□ 0.15
PHGDH-234ENST00000642041 JRKO75564 520 aa15.98■□□□□ 0.15
PHGDH-234ENST00000642041 ALPPP05187 535 aa15.98■□□□□ 0.15
PHGDH-234ENST00000642041 FESP07332 822 aa15.98■□□□□ 0.15
PHGDH-234ENST00000642041 LYNP07948 512 aa15.98■□□□□ 0.15
PHGDH-234ENST00000642041 THBS1P07996 1170 aa15.98■□□□□ 0.15
PHGDH-234ENST00000642041 LCN1P31025 176 aa15.98■□□□□ 0.15
PHGDH-234ENST00000642041 PRKAR1BP31321 381 aa15.98■□□□□ 0.15
PHGDH-234ENST00000642041 MC3RP41968 323 aa15.98■□□□□ 0.15
PHGDH-234ENST00000642041 STT3AP46977 705 aa15.98■□□□□ 0.15
PHGDH-234ENST00000642041 CSNK2BP67870 215 aa15.98■□□□□ 0.15
PHGDH-234ENST00000642041 DSG2Q14126 1118 aa15.98■□□□□ 0.15
PHGDH-234ENST00000642041 PRICKLE4Q2TBC4 344 aa15.98■□□□□ 0.15
PHGDH-234ENST00000642041 GPAT3Q53EU6 434 aa15.98■□□□□ 0.15
PHGDH-234ENST00000642041 DHRS4L2Q6PKH6 230 aa15.98■□□□□ 0.15
PHGDH-234ENST00000642041 QSOX2Q6ZRP7 698 aa15.98■□□□□ 0.15
PHGDH-234ENST00000642041 GALNT12Q8IXK2 581 aa15.98■□□□□ 0.15
PHGDH-234ENST00000642041 SYNPO2LQ9H987 977 aa15.98■□□□□ 0.15
PHGDH-234ENST00000642041 MKKSQ9NPJ1 570 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-234ENST00000642041 TUBA8Q9NY65 449 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-234ENST00000642041 MRTO4Q9UKD2 239 aaKnown RBP15.98■□□□□ 0.15
PHGDH-234ENST00000642041 BLOC1S6Q9UL45 172 aa15.98■□□□□ 0.15
PHGDH-234ENST00000642041 PCNX1Q96RV3 2341 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 A0A0A6YYC8 382 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-234ENST00000642041 IGHV5-10-1A0A0J9YXX1 117 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 LOC101059948A0A1B0GTJ6 334 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 A0A1B0GX78 115 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 C7orf72A4D263 438 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 I3L1I5 382 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-234ENST00000642041 TNFRSF11BO00300 401 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 SLC16A6O15403 523 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 PRAMEF2O60811 474 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 RDH16O75452 317 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 STX11O75558 287 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 GCM2O75603 506 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-234ENST00000642041 STATHP02808 62 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 CD63P08962 238 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 C8orf89P0DMQ9 161 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 TCN2P20062 427 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 IFNGR2P38484 337 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 MAN2A2P49641 1150 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 EIF2S3LQ2VIR3 472 aaKnown RBP15.97■□□□□ 0.15
PHGDH-234ENST00000642041 SNAP47Q5SQN1 464 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 OTUD3Q5T2D3 398 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-234ENST00000642041 CARM1Q86X55 608 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 EPHX4Q8IUS5 362 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 CHERPQ8IWX8 916 aaKnown RBP15.97■□□□□ 0.15
PHGDH-234ENST00000642041 NLGN4XQ8N0W4 816 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 VWA5B2Q8N398 1253 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 FAM86B1Q8N7N1 296 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 NLGN4YQ8NFZ3 816 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-234ENST00000642041 OR51Q1Q8NH59 317 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 GIPC3Q8TF64 312 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 HOXB13Q92826 284 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-234ENST00000642041 RIT1Q92963 219 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 ANKRD9Q96BM1 317 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-234ENST00000642041 COL21A1Q96P44 957 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 SPRY4Q9C004 299 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 ZNF696Q9H7X3 374 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 ZNF304Q9HCX3 659 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 SLC39A1Q9NY26 324 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 NDUFAF4Q9P032 175 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 KIF17Q9P2E2 1029 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 MYRFQ9Y2G1 1151 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 AKAP9Q99996 3911 aa15.97■□□□□ 0.15
PHGDH-234ENST00000642041 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 FGF17O60258 216 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 DBIP07108 87 aaKnown RBP15.96■□□□□ 0.15
PHGDH-234ENST00000642041 ITGAMP11215 1152 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 ENDOUP21128 410 aaKnown RBP15.96■□□□□ 0.15
PHGDH-234ENST00000642041 AQP1P29972 269 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 XCR1P46094 333 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 GTF2A1P52655 376 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-234ENST00000642041 DCAF7P61962 342 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 TUBA4AP68366 448 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 VLDLRP98155 873 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 DUSP8Q13202 625 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 KEAP1Q14145 624 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 GPR19Q15760 415 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 NKG7Q16617 165 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 EXOSC6Q5RKV6 272 aaKnown RBP15.96■□□□□ 0.15
PHGDH-234ENST00000642041 DCAF12Q5T6F0 453 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms