RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 POF1BQ8WVV4 589 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 ART5Q96L15 291 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 RIPOR3Q96MK2 946 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 CAMK1GQ96NX5 476 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 TMEM43Q9BTV4 400 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 PITHD1Q9GZP4 211 aaPredicted RBP12.93□□□□□ -0.34
PHGDH-233ENST00000642021 SLA2Q9H6Q3 261 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 IL20Q9NYY1 176 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 CBLCQ9ULV8 474 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 KCNK6Q9Y257 313 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 MRPS23Q9Y3D9 190 aaKnown RBP12.93□□□□□ -0.34
PHGDH-233ENST00000642021 A0A0C4DFX4 3053 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 IRGMA1A4Y4 181 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 ZC3H12DA2A288 527 aaKnown RBP12.93□□□□□ -0.34
PHGDH-233ENST00000642021 SCAMP1O15126 338 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 CPNE3O75131 537 aaKnown RBP12.93□□□□□ -0.34
PHGDH-233ENST00000642021 ADH1CP00326 375 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 HLA-DPB1P04440 258 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 IL12RB1P42701 662 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 PDX1P52945 283 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 CLDN2P57739 230 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 ST3GAL3Q11203 375 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 FAPQ12884 760 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 LYPD8Q6UX82 237 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 TRILQ7L0X0 811 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 SIRT6Q8N6T7 355 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 OTULINQ96BN8 352 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 ARMC5Q96C12 935 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 ELP4Q96EB1 424 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 KCNJ15Q99712 375 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 SLC6A20Q9NP91 592 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 HINT3Q9NQE9 182 aaKnown RBP12.93□□□□□ -0.34
PHGDH-233ENST00000642021 RPRD1BQ9NQG5 326 aaKnown RBP12.93□□□□□ -0.34
PHGDH-233ENST00000642021 DEC1Q9P2X7 70 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 PCDHGB7Q9Y5F8 929 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 FAM240BA0A1B0GVZ2 78 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 SYT5O00445 386 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 ALX3O95076 343 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 FUT1P19526 365 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 IFNGR2P38484 337 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 AGFG1P52594 562 aaKnown RBP12.92□□□□□ -0.34
PHGDH-233ENST00000642021 RAB25P57735 213 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 ABATP80404 500 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 DSG2Q14126 1118 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 CPOQ8IVL8 374 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 TCTE3Q8IZS6 198 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 CADM2Q8N3J6 435 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 SPERTQ8NA61 448 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 PIGXQ8TBF5 258 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 DNAJA4Q8WW22 397 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-233ENST00000642021 SMG7Q92540 1137 aaKnown RBP12.92□□□□□ -0.34
PHGDH-233ENST00000642021 SLC35A4Q96G79 324 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 ZC3HAV1LQ96H79 300 aaKnown RBP12.92□□□□□ -0.34
PHGDH-233ENST00000642021 TIMP4Q99727 224 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 PPIL3Q9H2H8 161 aaKnown RBP12.92□□□□□ -0.34
PHGDH-233ENST00000642021 EXOGQ9Y2C4 368 aaKnown RBP12.92□□□□□ -0.34
PHGDH-233ENST00000642021 CHD9Q3L8U1 2897 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 XIRP2A4UGR9 3374 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 A0A0G2JMP0 313 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 ERVH48-1M5A8F1 160 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 KLF4O43474 513 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 AKR7A2O43488 359 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 NARSO43776 548 aaKnown RBP12.92□□□□□ -0.34
PHGDH-233ENST00000642021 IGHA1P01876 353 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 F3P13726 295 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 AHRP35869 848 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 ATP6V1E1P36543 226 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 RAB28P51157 221 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 STXBP1P61764 594 aaKnown RBP12.92□□□□□ -0.34
PHGDH-233ENST00000642021 LRRC32Q14392 662 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 SLC48A1Q6P1K1 146 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 BHLHB9Q6PI77 547 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 GDF7Q7Z4P5 450 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 KLHL36Q8N4N3 616 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 SLC16A11Q8NCK7 471 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 OR56A1Q8NGH5 318 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 SFXN5Q8TD22 340 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 JPH3Q8WXH2 748 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-233ENST00000642021 GIMAP5Q96F15 307 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 ZNF681Q96N22 645 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 GFM1Q96RP9 751 aaKnown RBP12.92□□□□□ -0.34
PHGDH-233ENST00000642021 ENKD1Q9H0I2 346 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 PRSS16Q9NQE7 514 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 SPHK1Q9NYA1 384 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 APOBEC3BQ9UH17 382 aaKnown RBP12.92□□□□□ -0.34
PHGDH-233ENST00000642021 SLC13A4Q9UKG4 626 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 TRPM6Q9BX84 2022 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 CENPVL1A0A0U1RR11 272 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 A0A1B0GVC2 190 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 A6NIN4 97 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 ISM1B1AKI9 464 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 EMC8O43402 210 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 AKAP8O43823 692 aaKnown RBP12.92□□□□□ -0.34
PHGDH-233ENST00000642021 PLOD3O60568 738 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 ELK1P19419 428 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 CSNK2A2P19784 350 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-233ENST00000642021 FPR3P25089 353 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 DRD3P35462 400 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 GZMKP49863 264 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms