RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 NUP43Q8NFH3 380 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 ZG16BQ96DA0 208 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 CES1P1Q9UKY3 287 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 CHST2Q9Y4C5 530 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 A0A0X1KG70 313 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 C1QTNF3-AMACRE9PGA6 284 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 FKTNO75072 461 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 HMGN1P05114 100 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 MPIP34949 423 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 ATP6V1E1P36543 226 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 PLEKHM3Q6ZWE6 761 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 NKAIN4Q8IVV8 208 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 DEDD2Q8WXF8 326 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 C12orf66Q96MD2 445 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 GTPBP2Q9BX10 602 aaKnown RBP18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 H2AFY2Q9P0M6 372 aaPredicted RBP18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 TNFRSF10DQ9UBN6 386 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 CBLCQ9ULV8 474 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 CD8B2A6NJW9 211 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 NTN1O95631 604 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 CLTBP09497 229 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 C8orf89P0DMQ9 161 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 CD8BP10966 210 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 F3P13726 295 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 RGS8P57771 180 aaPredicted RBP18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 ABATP80404 500 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 MLF2Q15773 248 aaPredicted RBP18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 SIGIRRQ6IA17 410 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 MBOAT2Q6ZWT7 520 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 ZNF767PQ75MW2 155 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 C16orf62Q7Z3J2 963 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 ABI3BPQ7Z7G0 1075 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 TOR1AIP2Q8NFQ8 470 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 OR2T33Q8NG76 320 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 OR2L5Q8NG80 312 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 SNAPC3Q92966 411 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 INSM2Q96T92 566 aaPredicted RBP18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 RNF208Q9H0X6 261 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 KCNN2Q9H2S1 579 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 EQTNQ9NQ60 294 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 DEC1Q9P2X7 70 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 CDH10Q9Y6N8 788 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 CRYZL1O95825 349 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 STATHP02808 62 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 MC3RP41968 323 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 GPR4P46093 362 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 RRAS2P62070 204 aaPredicted RBP18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 TMEM91Q6ZNR0 172 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 CREB3L2Q70SY1 520 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 NRMQ8IXM6 262 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 BBS1Q8NFJ9 593 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 ELP4Q96EB1 424 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 UBL7Q96S82 380 aaPredicted RBP18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 TRMT61BQ9BVS5 477 aaKnown RBP18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 RAB11FIP5Q9BXF6 653 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 XKR8Q9H6D3 395 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 DIABLOQ9NR28 239 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 NLGN3Q9NZ94 848 aa18.81■□□□□ 0.6
SYNGAP1-227ENST00000638142 C2orf92A0A1B0GVN3 265 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 GSAPA4D1B5 854 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 GPR89AB7ZAQ6 455 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 OR5F1O95221 314 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 HNRNPA1P09651 372 aaKnown RBP eCLIP18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 GPR89BP0CG08 455 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 ARSBP15848 533 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 AHRP35869 848 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 RNF144AP50876 292 aaPredicted RBP18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 INSL4Q14641 139 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 CEBPEQ15744 281 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 C18orf63Q68DL7 685 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 KLBQ86Z14 1044 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 OR2L8Q8NGY9 312 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 ZNF296Q8WUU4 475 aaPredicted RBP18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 MACROD1Q9BQ69 325 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 POLMQ9NP87 494 aaPredicted RBP18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 MRPS30Q9NP92 439 aaKnown RBP18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 ISM1B1AKI9 464 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 AGRPO00253 132 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 RGS9O75916 674 aaPredicted RBP18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 NDUFV2P19404 249 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 PKLRP30613 574 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 MTNR1BP49286 362 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 MNX1P50219 401 aaPredicted RBP18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 RAB25P57735 213 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 GDF7Q7Z4P5 450 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 CREB3L1Q96BA8 519 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 SLC41A3Q96GZ6 507 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 MCHR1Q99705 422 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 ACTRT3Q9BYD9 372 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 CSNK1G3Q9Y6M4 447 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 NUMA1Q14980 2115 aa18.8■□□□□ 0.6
SYNGAP1-227ENST00000638142 IGLON5A6NGN9 336 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 J3QRE1 110 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 GTPBP1O00178 669 aaKnown RBP18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 ACRP10323 421 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 TSFMP43897 325 aaKnown RBP18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 OR3A3P47888 321 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 CTBP2P56545 445 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 FZD5Q13467 585 aa18.79■□□□□ 0.6
SYNGAP1-227ENST00000638142 DEFB115Q30KQ5 88 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms