RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 FADS6Q8N9I5 356 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 CCDC168Q8NDH2 2452 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 NUP43Q8NFH3 380 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 OR2M3Q8NG83 312 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 CEP70Q8NHQ1 597 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 FBXO30Q8TB52 745 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 PIK3R3Q92569 461 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 SLC9A6Q92581 669 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 WNT2BQ93097 391 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 CAVIN3Q969G5 261 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 INTS12Q96CB8 462 aaKnown RBP13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 PPP3R2Q96LZ3 170 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 ZFP3Q96NJ6 502 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 MS4A4EQ96PG1 132 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 SFXN3Q9BWM7 321 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 ACBD3Q9H3P7 528 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 ACSS1Q9NUB1 689 aaPredicted RBP13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 DNAJB12Q9NXW2 375 aaKnown RBP13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 MED11Q9P086 117 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 V9GYY5 206 aaPredicted RBP13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 TACC2O95359 2948 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 B4DXG7 233 aa13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 PEX11AO75192 247 aa13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 SLU7O95391 586 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 POU3F2P20265 443 aaPredicted RBP13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 EFNA1P20827 205 aaPredicted RBP13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 SERPINB5P36952 375 aa13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 CLDN18P56856 261 aa13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 FOXF2Q12947 444 aa13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 UGT3A2Q3SY77 523 aa13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 ATP6AP1LQ52LC2 224 aa13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 LRIG3Q6UXM1 1119 aa13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 P4HA3Q7Z4N8 544 aa13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 ADGRE4PQ86SQ3 457 aa13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 GCNT2Q8N0V5 402 aa13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 CDRT4Q8N9R6 151 aa13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 PPP1R14CQ8TAE6 165 aa13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 DUSP19Q8WTR2 217 aa13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 FAM222BQ8WU58 562 aa13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 MTERF3Q96E29 417 aa13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 GPATCH1Q9BRR8 931 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 G6PC3Q9BUM1 346 aa13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 POLDIP3Q9BY77 421 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 CLCF1Q9UBD9 225 aa13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 GIMAP2Q9UG22 337 aa13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 HCFC1P51610 2035 aa13.59□□□□□ -0.23
CACNA1A-230ENST00000636768 TUBAL3A6NHL2 446 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 SCAMP2O15127 329 aaKnown RBP13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 EMC8O43402 210 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 GMFGO60234 142 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 SKAP2O75563 359 aaPredicted RBP13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 CTAG2O75638 210 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 NKX2-2O95096 273 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 RCBTB2O95199 551 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 PEPDP12955 493 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 RPL3P39023 403 aaKnown RBP13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 FRKP42685 505 aaPredicted RBP13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 CPA2P48052 419 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 B3GALT5-AS1P59052 145 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 PRR5P85299 388 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 BCL2A1Q16548 175 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 GRAMD1BQ3KR37 738 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 KRT71Q3SY84 523 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 XKR7Q5GH72 579 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 GALNT10Q86SR1 603 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 EXOC3L1Q86VI1 746 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 MEIOBQ8N635 442 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 JADE3Q92613 823 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 NRGNQ92686 78 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 CHMP6Q96FZ7 201 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 UCN2Q96RP3 112 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 C1orf50Q9BV19 199 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 RTN4RQ9BZR6 473 aa13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 CLEC4MQ9H2X3 399 aaPredicted RBP13.58□□□□□ -0.24
CACNA1A-230ENST00000636768 A6NNC1 897 aa13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 SEC14L5O43304 696 aa13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 ANGPTL1O95841 491 aa13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 IGKV1D-16P01601 117 aa13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 BPGMP07738 259 aa13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 ALOX5P09917 674 aa13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 ACP2P11117 423 aa13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 CREB1P16220 341 aa13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 EEFSECP57772 596 aaKnown RBP13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 SORDQ00796 357 aa13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 C17orf67Q0P5P2 114 aa13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 FBXW10Q5XX13 1052 aa13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 MFSD12Q6NUT3 480 aa13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 LUZP2Q86TE4 346 aa13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 COX18Q8N8Q8 333 aa13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 FNDC5Q8NAU1 212 aa13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 OR7A2PQ8NGA2 310 aa13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 OR5M1Q8NGP8 315 aa13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 GOT1L1Q8NHS2 421 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 C1GALT1C1Q96EU7 318 aa13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 PIGQQ9BRB3 760 aa13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 YIPF4Q9BSR8 244 aa13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 TMEM109Q9BVC6 243 aa13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 RBM24Q9BX46 236 aaKnown RBP13.57□□□□□ -0.24
CACNA1A-230ENST00000636768 PIGMQ9H3S5 423 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms