RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 PPP5CP53041 499 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 PIP5KL1Q5T9C9 394 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 EIF5AL1Q6IS14 154 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 RBMXL3Q8N7X1 1067 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 SLC30A2Q9BRI3 323 aa16.89■□□□□ 0.29
CACNA1A-227ENST00000636549 DFNA5O60443 496 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 DIO3P55073 304 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 KCNAB2Q13303 367 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 GAB1Q13480 694 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 MSS51Q4VC12 460 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 ZNF468Q5VIY5 522 aaPredicted RBP16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 ZNF551Q7Z340 670 aaPredicted RBP16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 CD163Q86VB7 1156 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 OR52R1Q8NGF1 315 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 PLSCR3Q9NRY6 295 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 MRPL22Q9NWU5 206 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 DDCP20711 480 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 CAPN3P20807 821 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 MAB21L1Q13394 359 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 MBTPS1Q14703 1052 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 NELL2Q99435 816 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 DERL2Q9GZP9 239 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 APBB3O95704 486 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 C5AR1P21730 350 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 P2RX1P51575 399 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 DCAF12Q5T6F0 453 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 PLEKHG7Q6ZR37 379 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 OR4K3Q96R72 315 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 ESX1Q8N693 406 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 HAS2Q92819 552 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 ZNF559Q9BR84 538 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 HCAR1Q9BXC0 346 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 NANOGQ9H9S0 305 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 MYH10P35580 1976 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 M0R233 179 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 F3P13726 295 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 HNRNPA2B1P22626 353 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 HSF5Q4G112 596 aaPredicted RBP16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 BEX5Q5H9J7 111 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 DCST2Q5T1A1 773 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 ZC3HC1Q86WB0 502 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 FCGR1BQ92637 280 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 RBM14Q96PK6 669 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 BMPR1AP36894 532 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 ARSFP54793 590 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 CCNJQ5T5M9 372 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 DCAF12L1Q5VU92 463 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 MAMDC2Q7Z304 686 aaPredicted RBP16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 GID4Q8IVV7 300 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 SLC35F2Q8IXU6 374 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 ADOQ96SZ5 270 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 OLAHQ9NV23 265 aa16.88■□□□□ 0.29
CACNA1A-227ENST00000636549 TRAV18A0A075B6X5 111 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 CD300LBA8K4G0 201 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 M0R3H8 397 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 HNF1AP20823 631 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 PSMB5P28074 263 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 PITX1P78337 314 aaPredicted RBP16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 APOOQ9BUR5 198 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 PCDH17O14917 1159 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 GSTT2P0CG29 244 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 F8A1P23610 371 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 PDE7AQ13946 482 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 BPIFCQ8NFQ6 507 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 CDS1Q92903 461 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 KLHL21Q9UJP4 597 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 NOCTQ9UK39 431 aaKnown RBP16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 EXOSC1Q9Y3B2 195 aaKnown RBP16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 TRAV27A0A087WT01 109 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 SPDEFO95238 335 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 H2AFB2P0C5Z0 115 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 FOXN2P32314 431 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 EXOSC6Q5RKV6 272 aaKnown RBP16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 NRMQ8IXM6 262 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 C12orf45Q8N5I9 185 aaPredicted RBP16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 FBXW5Q969U6 566 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 FCRL3Q96P31 734 aaPredicted RBP16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 DEFB127Q9H1M4 99 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 PRSS51A0A1B0GVH4 220 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 CENPBD1B2RD01 187 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 CSNK1A1P48729 337 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 ZNF829Q3KNS6 432 aaPredicted RBP16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 UGDHO60701 494 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 ZNF865P0CJ78 1059 aaPredicted RBP16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 STC1P52823 247 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 TLE1Q04724 770 aa16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 TSNAXQ99598 290 aaKnown RBP16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 AK6Q9Y3D8 172 aaKnown RBP16.87■□□□□ 0.29
CACNA1A-227ENST00000636549 HSD17B6O14756 317 aa16.86■□□□□ 0.29
CACNA1A-227ENST00000636549 SLC31A2O15432 143 aa16.86■□□□□ 0.29
CACNA1A-227ENST00000636549 TIMP1P01033 207 aa16.86■□□□□ 0.29
CACNA1A-227ENST00000636549 ERVK-25P63136 954 aa16.86■□□□□ 0.29
CACNA1A-227ENST00000636549 NDUFAF5Q5TEU4 345 aa16.86■□□□□ 0.29
CACNA1A-227ENST00000636549 NIPAL3Q6P499 406 aa16.86■□□□□ 0.29
CACNA1A-227ENST00000636549 FAM185AQ8N0U4 392 aa16.86■□□□□ 0.29
CACNA1A-227ENST00000636549 BHLHE23Q8NDY6 225 aa16.86■□□□□ 0.29
CACNA1A-227ENST00000636549 DDX1Q92499 740 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-227ENST00000636549 TCEAL4Q96EI5 215 aa16.86■□□□□ 0.29
CACNA1A-227ENST00000636549 C1orf226A1L170 272 aa16.86■□□□□ 0.29
CACNA1A-227ENST00000636549 SIGLEC6O43699 453 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms