RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 NTNG1Q9Y2I2 539 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 NAALAD2Q9Y3Q0 740 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 AKAP13Q12802 2813 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 ABCB11O95342 1321 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 FAM205AQ6ZU69 1335 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 COL6A6A6NMZ7 2263 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 ZGRF1Q86YA3 2104 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 BDP1A6H8Y1 2624 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 CACNA1EQ15878 2313 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 MED13Q9UHV7 2174 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 HCFC1P51610 2035 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 PCNX3Q9H6A9 2034 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 CNOT1A5YKK6 2376 aaKnown RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 MPDZO75970 2070 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 GVINP1Q7Z2Y8 2422 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 A0A087X0K7 114 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 A0A0A6YYC8 382 aaPredicted RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 IGHV3-16A0A0C4DH30 117 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 A0A0J9YVX5 310 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 A0A0U1RQK1 487 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 A0A1B0GUL7 405 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 A0A1W2PPR1 153 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 SH3PXD2BA1X283 911 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF320A2RRD8 509 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 ZSCAN5CA6NGD5 496 aaPredicted RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 YJEFN3A6XGL0 299 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 FOXI3A8MTJ6 420 aaPredicted RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 RNF212BA8MTL3 300 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 I3L1I5 382 aaPredicted RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 K7EQG2 157 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 RNF103O00237 685 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 EEF2KO00418 725 aaKnown RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 SAP18O00422 153 aaKnown RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 MPHOSPH10O00566 681 aaKnown RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 EI24O14681 340 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 TNFSF11O14788 317 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 SLC30A4O14863 429 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 P2RX6O15547 441 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 BCL2L11O43521 198 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 NMT2O60551 498 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 IDH1O75874 414 aaKnown RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 KBTBD11O94819 623 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 OR6B1O95007 311 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 VENTXO95231 258 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 PRAMEF12O95522 483 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 CPNE6O95741 557 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 SEMA4FO95754 770 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 LY6G6DO95868 133 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 SLC16A8O95907 504 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 GOT2P00505 430 aaKnown RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 RENP00797 406 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 EPOP01588 193 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 PRB2P02812 416 aaPredicted RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF853P0CG23 659 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 UROSP10746 265 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 PGAM2P15259 253 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 CD1EP15812 388 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF18P17022 549 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 BCL3P20749 454 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 EDNRAP25101 427 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 GDF1P27539 372 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 MARCKSP29966 332 aaPredicted RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 TIA1P31483 386 aaKnown RBP eCLIP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 FRKP42685 505 aaPredicted RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 MTIF2P46199 727 aaKnown RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 TRPC1P48995 793 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 SERPINH1P50454 418 aaKnown RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 ARHGDIAP52565 204 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 MFAP2P55001 183 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 SNU13P55769 128 aaKnown RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 STX1BP61266 288 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 RPL27P61353 136 aaKnown RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 HERV-K104P63124 156 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 NOP14P78316 857 aaKnown RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 NAAAQ02083 359 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 SP4Q02446 784 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 MECOMQ03112 1051 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 GABPAQ06546 454 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 ARHGAP1Q07960 439 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 OVGP1Q12889 678 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 BNIP1Q12981 228 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 GPR50Q13585 617 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 SCARB2Q14108 478 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 SERTAD2Q14140 314 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 PPP1R3AQ16821 1122 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 Q1RN00 199 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 GSG1Q2KHT4 349 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 SMU1Q2TAY7 513 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 POM121L1PQ3SYA9 428 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 TTC31Q49AM3 519 aaPredicted RBP0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 C14orf28Q4W4Y0 310 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 UNC50Q53HI1 259 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 CMPK2Q5EBM0 449 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 VWA2Q5GFL6 755 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 SLC10A5Q5PT55 438 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 ACER2Q5QJU3 275 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 FAM182AQ5T1J6 154 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 HECTD3Q5T447 861 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 BEND3Q5T5X7 828 aa0.84□□□□□ -2.27
SMARCB1-209ENST00000635578 PRAMEF8Q5VWM4 474 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms