RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 SNX13Q9Y5W8 968 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 TRIM64BA6NI03 449 aa13.36□□□□□ -0.27
LINC00339-208ENST00000634934 OR12D1P0DN82 309 aa13.36□□□□□ -0.27
LINC00339-208ENST00000634934 ACP2P11117 423 aa13.36□□□□□ -0.27
LINC00339-208ENST00000634934 GABRA3P34903 492 aa13.36□□□□□ -0.27
LINC00339-208ENST00000634934 ANXA11P50995 505 aaKnown RBP13.36□□□□□ -0.27
LINC00339-208ENST00000634934 MVDP53602 400 aa13.36□□□□□ -0.27
LINC00339-208ENST00000634934 TMPRSS3P57727 454 aa13.36□□□□□ -0.27
LINC00339-208ENST00000634934 TCTN3Q6NUS6 607 aa13.36□□□□□ -0.27
LINC00339-208ENST00000634934 CDC73Q6P1J9 531 aa13.36□□□□□ -0.27
LINC00339-208ENST00000634934 SLC44A2Q8IWA5 706 aaPredicted RBP13.36□□□□□ -0.27
LINC00339-208ENST00000634934 ADGRG5Q8IZF4 528 aa13.36□□□□□ -0.27
LINC00339-208ENST00000634934 GALNT4Q8N4A0 578 aa13.36□□□□□ -0.27
LINC00339-208ENST00000634934 OR8K3Q8NH51 312 aa13.36□□□□□ -0.27
LINC00339-208ENST00000634934 ZNF420Q8TAQ5 688 aaPredicted RBP13.36□□□□□ -0.27
LINC00339-208ENST00000634934 BRIX1Q8TDN6 353 aaKnown RBP13.36□□□□□ -0.27
LINC00339-208ENST00000634934 CANT1Q8WVQ1 401 aa13.36□□□□□ -0.27
LINC00339-208ENST00000634934 XAGE5Q8WWM1 108 aa13.36□□□□□ -0.27
LINC00339-208ENST00000634934 TMEM125Q96AQ2 219 aa13.36□□□□□ -0.27
LINC00339-208ENST00000634934 PPP1R14BQ96C90 147 aa13.36□□□□□ -0.27
LINC00339-208ENST00000634934 OR7D2Q96RA2 312 aa13.36□□□□□ -0.27
LINC00339-208ENST00000634934 ING2Q9H160 280 aa13.36□□□□□ -0.27
LINC00339-208ENST00000634934 PIF1Q9H611 641 aa13.36□□□□□ -0.27
LINC00339-208ENST00000634934 CMTM6Q9NX76 183 aa13.36□□□□□ -0.27
LINC00339-208ENST00000634934 OR10H1Q9Y4A9 318 aa13.36□□□□□ -0.27
LINC00339-208ENST00000634934 ATMQ13315 3056 aa13.36□□□□□ -0.27
LINC00339-208ENST00000634934 TCRBV5S2A0A599 114 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 A6NL46 340 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 H0YAE9 185 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 WWP2O00308 870 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 OR6B1O95007 311 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 GPX2P18283 190 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 MSX2P35548 267 aaPredicted RBP13.35□□□□□ -0.27
LINC00339-208ENST00000634934 PPICP45877 212 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 MAN2A2P49641 1150 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 NR0B1P51843 470 aaKnown RBP13.35□□□□□ -0.27
LINC00339-208ENST00000634934 UCNP55089 124 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 DCAF7P61962 342 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 PSG6Q00889 435 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 FADDQ13158 208 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 DUSP5Q16690 384 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 CYP51A1Q16850 503 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 SLC36A3Q495N2 470 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 FCRLBQ6BAA4 426 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 KRT80Q6KB66 452 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 NPSR1Q6W5P4 371 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 C16orf47Q6ZP98 133 aaPredicted RBP13.35□□□□□ -0.27
LINC00339-208ENST00000634934 C10orf111Q8N326 155 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 SIRT6Q8N6T7 355 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 FAM156AQ8NDB6 213 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 OR10A6Q8NH74 314 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 NUBPLQ8TB37 319 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 MIPOL1Q8TD10 442 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 PIK3R3Q92569 461 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 CDS1Q92903 461 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 ADIPOR1Q96A54 375 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 SLC35A4Q96G79 324 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 MPP4Q96JB8 637 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 LCORQ96JN0 433 aaPredicted RBP13.35□□□□□ -0.27
LINC00339-208ENST00000634934 RDH12Q96NR8 316 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 SLC29A1Q99808 456 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 LMF2Q9BU23 707 aaKnown RBP13.35□□□□□ -0.27
LINC00339-208ENST00000634934 NXF5Q9H1B4 397 aaKnown RBP13.35□□□□□ -0.27
LINC00339-208ENST00000634934 PIGUQ9H490 435 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 KAT8Q9H7Z6 458 aaKnown RBP13.35□□□□□ -0.27
LINC00339-208ENST00000634934 Q9N2J8 555 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 RSL24D1Q9UHA3 163 aaKnown RBP13.35□□□□□ -0.27
LINC00339-208ENST00000634934 GPR55Q9Y2T6 319 aaPredicted RBP13.35□□□□□ -0.27
LINC00339-208ENST00000634934 GMEB1Q9Y692 573 aa13.35□□□□□ -0.27
LINC00339-208ENST00000634934 GXYLT2A0PJZ3 443 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 TTC36A6NLP5 189 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 DUXAA6NLW8 204 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 HMGN4O00479 90 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 DLGAP1O14490 977 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 TRMUO75648 421 aaKnown RBP13.34□□□□□ -0.27
LINC00339-208ENST00000634934 PRSS23O95084 383 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 NKX2-2O95096 273 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 NUDT7P0C024 238 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 CT45A8P0DMV1 189 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 CT45A9P0DMV2 189 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 TCN1P20061 433 aaPredicted RBP13.34□□□□□ -0.27
LINC00339-208ENST00000634934 DRD5P21918 477 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 DSTNP60981 165 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 RAPSNQ13702 412 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 CT45A2Q5DJT8 189 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 TBCELQ5QJ74 424 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 GCNT6Q5T4J0 391 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 ATAD3BQ5T9A4 648 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 JMJD6Q6NYC1 403 aaPredicted RBP13.34□□□□□ -0.27
LINC00339-208ENST00000634934 IFNEQ86WN2 208 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 LGI4Q8N135 537 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 GALNT16Q8N428 558 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 SLC5A8Q8N695 610 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 COX18Q8N8Q8 333 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 STACQ99469 402 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 TUBA1CQ9BQE3 449 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 GRIP2Q9C0E4 1043 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 LHPPQ9H008 270 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 CDCP1Q9H5V8 836 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 DUSP22Q9NRW4 184 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms