RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 PDE7AQ13946 482 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 TAF13Q15543 124 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 MAPK11Q15759 364 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 KNOP1Q1ED39 458 aaKnown RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 SGSM1Q2NKQ1 1148 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 HNRNPA1L2Q32P51 320 aaKnown RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 IFI44LQ53G44 452 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 C10orf120Q5SQS8 335 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 CCNYL2Q5T2Q4 361 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 C9orf64Q5T6V5 341 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 HES3Q5TGS1 186 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 KLHL10Q6JEL2 608 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 TTC27Q6P3X3 843 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 CLEC18BQ6UXF7 455 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 TPGS1Q6ZTW0 290 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 STXBP4Q6ZWJ1 553 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 ASPGQ86U10 573 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 SLC9B2Q86UD5 537 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 RTN4RL2Q86UN3 420 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 PIGZQ86VD9 579 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 TRIM69Q86WT6 500 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 SERPINA12Q8IW75 414 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 LAX1Q8IWV1 398 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 NELFCDQ8IXH7 590 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 ZNF683Q8IZ20 524 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 CDK20Q8IZL9 346 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 NAGSQ8N159 534 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 SLC22A18ASQ8N1D0 253 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 DEFB119Q8N690 84 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 METTL27Q8N6F8 245 aaPredicted RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 TEX9Q8N6V9 391 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 CLEC1AQ8NC01 280 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 OR2T34Q8NGX1 318 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 GOLGA5Q8TBA6 731 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 SECTM1Q8WVN6 248 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 SLC13A3Q8WWT9 602 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 AZIN2Q96A70 460 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 CCDC127Q96BQ5 260 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 TBC1D31Q96DN5 1066 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 ALG14Q96F25 216 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 CFAP36Q96G28 342 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 NSL1Q96IY1 281 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 RUNDC3BQ96NL0 473 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 XPO6Q96QU8 1125 aaKnown RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 RUFY1Q96T51 708 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 NAP1L3Q99457 506 aaPredicted RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 PRMT1Q99873 361 aaKnown RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 CCDC3Q9BQI4 270 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 NUP58Q9BVL2 599 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 DUSP16Q9BY84 665 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 OR2B2Q9GZK3 357 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 ABCG8Q9H221 673 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 C1orf21Q9H246 121 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 LHX5Q9H2C1 402 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 HSD3B7Q9H2F3 369 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 RIMS4Q9H426 269 aaPredicted RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 ZSCAN16Q9H4T2 348 aaPredicted RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 CYP3A43Q9HB55 503 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 SGK2Q9HBY8 427 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 CHST11Q9NPF2 352 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 PRSS16Q9NQE7 514 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 CISHQ9NSE2 258 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 FAM207AQ9NSI2 230 aaPredicted RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 FAM49BQ9NUQ9 324 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 TRIM10Q9UDY6 481 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 TRMT6Q9UJA5 497 aaKnown RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 HOOK1Q9UJC3 728 aaKnown RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 GGA2Q9UJY4 613 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 LSM7Q9UK45 103 aaKnown RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 SCML1Q9UN30 329 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 NEU3Q9UQ49 428 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 SMC3Q9UQE7 1217 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 FOXA2Q9Y261 457 aaPredicted RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 ZNF510Q9Y2H8 683 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 RPH3AQ9Y2J0 694 aaPredicted RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 OR51B4Q9Y5P0 310 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 HIVEP1P15822 2718 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 ANKRD36A6QL64 1941 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 SDK2Q58EX2 2172 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 HRNRQ86YZ3 2850 aaPredicted RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 ANK2Q01484 3957 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 TRPM6Q9BX84 2022 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 IGLV9-49A0A0B4J1Y8 123 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 TMEM129A0AVI4 362 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 MAGEB16A2A368 324 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 KRT87PA6NCN2 255 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 ANKDD1BA6NHY2 528 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 PRAC2D3DTV9 90 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 C16orf97H3BN30 126 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 ATP6V0E1O15342 81 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 POLR2DO15514 142 aaKnown RBP2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 ZNF821O75541 412 aaPredicted RBP2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 B3GALNT1O75752 331 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 ALPPP05187 535 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 GP1BAP07359 652 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 CTSLP07711 333 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 SBK2P0C263 348 aa2.19□□□□□ -2.06
SMARCB1-208ENST00000634926 IGHV4-38-2P0DP08 117 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms