RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 PON3Q15166 354 aa17.08■□□□□ 0.32
SMN2-215ENST00000628696 SGCBQ16585 318 aa17.08■□□□□ 0.32
SMN2-215ENST00000628696 DECR1Q16698 335 aa17.08■□□□□ 0.32
SMN2-215ENST00000628696 PRSS53Q2L4Q9 553 aa17.08■□□□□ 0.32
SMN2-215ENST00000628696 EXOC3L2Q2M3D2 409 aa17.08■□□□□ 0.32
SMN2-215ENST00000628696 CYP27C1Q4G0S4 372 aa17.08■□□□□ 0.32
SMN2-215ENST00000628696 TMEM107Q6UX40 140 aa17.08■□□□□ 0.32
SMN2-215ENST00000628696 MARCH3Q86UD3 253 aa17.08■□□□□ 0.32
SMN2-215ENST00000628696 HS3ST6Q96QI5 342 aa17.08■□□□□ 0.32
SMN2-215ENST00000628696 KCNA7Q96RP8 456 aa17.08■□□□□ 0.32
SMN2-215ENST00000628696 PIGQQ9BRB3 760 aa17.08■□□□□ 0.32
SMN2-215ENST00000628696 RTN4RQ9BZR6 473 aa17.08■□□□□ 0.32
SMN2-215ENST00000628696 ZNF175Q9Y473 711 aa17.08■□□□□ 0.32
SMN2-215ENST00000628696 A0A087WUV0 522 aaPredicted RBP17.07■□□□□ 0.32
SMN2-215ENST00000628696 TRIM64A6NGJ6 449 aa17.07■□□□□ 0.32
SMN2-215ENST00000628696 TRIM64BA6NI03 449 aa17.07■□□□□ 0.32
SMN2-215ENST00000628696 MYO1GB0I1T2 1018 aa17.07■□□□□ 0.32
SMN2-215ENST00000628696 LINC01387J3KSC0 135 aa17.07■□□□□ 0.32
SMN2-215ENST00000628696 CGAP01215 116 aa17.07■□□□□ 0.32
SMN2-215ENST00000628696 IMPDH1P20839 514 aa17.07■□□□□ 0.32
SMN2-215ENST00000628696 TBXA2RP21731 343 aa17.07■□□□□ 0.32
SMN2-215ENST00000628696 CCKARP32238 428 aa17.07■□□□□ 0.32
SMN2-215ENST00000628696 LGSNQ5TDP6 509 aa17.07■□□□□ 0.32
SMN2-215ENST00000628696 PRSS57Q6UWY2 283 aa17.07■□□□□ 0.32
SMN2-215ENST00000628696 C20orf204Q6ZNR8 217 aa17.07■□□□□ 0.32
SMN2-215ENST00000628696 C1GALT1C1Q96EU7 318 aa17.07■□□□□ 0.32
SMN2-215ENST00000628696 PRRG4Q9BZD6 226 aa17.07■□□□□ 0.32
SMN2-215ENST00000628696 RNF122Q9H9V4 155 aa17.07■□□□□ 0.32
SMN2-215ENST00000628696 MIEF1Q9NQG6 463 aa17.07■□□□□ 0.32
SMN2-215ENST00000628696 ABCG2Q9UNQ0 655 aa17.07■□□□□ 0.32
SMN2-215ENST00000628696 TLN2Q9Y4G6 2542 aa17.07■□□□□ 0.32
SMN2-215ENST00000628696 A0A087WV62 115 aa17.06■□□□□ 0.32
SMN2-215ENST00000628696 EXOC1LA0A1B0GW35 172 aa17.06■□□□□ 0.32
SMN2-215ENST00000628696 CCDC151A5D8V7 595 aa17.06■□□□□ 0.32
SMN2-215ENST00000628696 ENO1P06733 434 aaKnown RBP17.06■□□□□ 0.32
SMN2-215ENST00000628696 CD8BP10966 210 aa17.06■□□□□ 0.32
SMN2-215ENST00000628696 DDCP20711 480 aa17.06■□□□□ 0.32
SMN2-215ENST00000628696 ATP5F1P24539 256 aaPredicted RBP17.06■□□□□ 0.32
SMN2-215ENST00000628696 LCP2Q13094 533 aa17.06■□□□□ 0.32
SMN2-215ENST00000628696 FGFBP1Q14512 234 aa17.06■□□□□ 0.32
SMN2-215ENST00000628696 ZNHIT3Q15649 155 aaPredicted RBP17.06■□□□□ 0.32
SMN2-215ENST00000628696 GALNT18Q6P9A2 607 aa17.06■□□□□ 0.32
SMN2-215ENST00000628696 C22orf34Q6ZV56 151 aa17.06■□□□□ 0.32
SMN2-215ENST00000628696 Q9N2J8 555 aa17.06■□□□□ 0.32
SMN2-215ENST00000628696 DDX18Q9NVP1 670 aaKnown RBP17.06■□□□□ 0.32
SMN2-215ENST00000628696 FAM120CQ9NX05 1096 aaKnown RBP17.06■□□□□ 0.32
SMN2-215ENST00000628696 MRTO4Q9UKD2 239 aaKnown RBP17.06■□□□□ 0.32
SMN2-215ENST00000628696 C19orf53Q9UNZ5 99 aaPredicted RBP17.06■□□□□ 0.32
SMN2-215ENST00000628696 STK38LQ9Y2H1 464 aa17.06■□□□□ 0.32
SMN2-215ENST00000628696 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.06■□□□□ 0.32
SMN2-215ENST00000628696 CSPG4Q6UVK1 2322 aa17.05■□□□□ 0.32
SMN2-215ENST00000628696 SHISA8B8ZZ34 492 aa17.05■□□□□ 0.32
SMN2-215ENST00000628696 URI1O94763 535 aaPredicted RBP17.05■□□□□ 0.32
SMN2-215ENST00000628696 IL33O95760 270 aa17.05■□□□□ 0.32
SMN2-215ENST00000628696 NTSP30990 170 aa17.05■□□□□ 0.32
SMN2-215ENST00000628696 GSTM5P46439 218 aa17.05■□□□□ 0.32
SMN2-215ENST00000628696 PRKAA2P54646 552 aa17.05■□□□□ 0.32
SMN2-215ENST00000628696 PKNOX1P55347 436 aa17.05■□□□□ 0.32
SMN2-215ENST00000628696 ZNF763Q0D2J5 394 aa17.05■□□□□ 0.32
SMN2-215ENST00000628696 IMPG1Q17R60 797 aa17.05■□□□□ 0.32
SMN2-215ENST00000628696 SLC22A9Q8IVM8 553 aa17.05■□□□□ 0.32
SMN2-215ENST00000628696 GFM2Q969S9 779 aaKnown RBP17.05■□□□□ 0.32
SMN2-215ENST00000628696 TBL1XR1Q9BZK7 514 aa17.05■□□□□ 0.32
SMN2-215ENST00000628696 SHCBP1LQ9BZQ2 653 aa17.05■□□□□ 0.32
SMN2-215ENST00000628696 GLIPR2Q9H4G4 154 aa17.05■□□□□ 0.32
SMN2-215ENST00000628696 RAI1Q7Z5J4 1906 aaPredicted RBP17.05■□□□□ 0.32
SMN2-215ENST00000628696 UPK1AO00322 258 aa17.04■□□□□ 0.32
SMN2-215ENST00000628696 AQP8O94778 261 aa17.04■□□□□ 0.32
SMN2-215ENST00000628696 GABRA3P34903 492 aa17.04■□□□□ 0.32
SMN2-215ENST00000628696 EIF1AXP47813 144 aaKnown RBP17.04■□□□□ 0.32
SMN2-215ENST00000628696 PSMD4P55036 377 aaKnown RBP17.04■□□□□ 0.32
SMN2-215ENST00000628696 GLYR1Q49A26 553 aaPredicted RBP17.04■□□□□ 0.32
SMN2-215ENST00000628696 PLEKHM3Q6ZWE6 761 aa17.04■□□□□ 0.32
SMN2-215ENST00000628696 FAM214BQ7L5A3 538 aa17.04■□□□□ 0.32
SMN2-215ENST00000628696 PRIMA1Q86XR5 153 aa17.04■□□□□ 0.32
SMN2-215ENST00000628696 CCNYL1Q8N7R7 359 aa17.04■□□□□ 0.32
SMN2-215ENST00000628696 PPP1R14CQ8TAE6 165 aa17.04■□□□□ 0.32
SMN2-215ENST00000628696 C11orf24Q96F05 449 aaPredicted RBP17.04■□□□□ 0.32
SMN2-215ENST00000628696 MARK4Q96L34 752 aa17.04■□□□□ 0.32
SMN2-215ENST00000628696 MID1IP1Q9NPA3 183 aa17.04■□□□□ 0.32
SMN2-215ENST00000628696 SIRT5Q9NXA8 310 aa17.04■□□□□ 0.32
SMN2-215ENST00000628696 GRID1Q9ULK0 1009 aa17.04■□□□□ 0.32
SMN2-215ENST00000628696 CLEC4AQ9UMR7 237 aa17.04■□□□□ 0.32
SMN2-215ENST00000628696 VDAC3Q9Y277 283 aa17.04■□□□□ 0.32
SMN2-215ENST00000628696 POLR3HQ9Y535 204 aaPredicted RBP17.04■□□□□ 0.32
SMN2-215ENST00000628696 AP4B1Q9Y6B7 739 aa17.04■□□□□ 0.32
SMN2-215ENST00000628696 USF3Q68DE3 2245 aa17.04■□□□□ 0.32
SMN2-215ENST00000628696 HIVEP2P31629 2446 aa17.04■□□□□ 0.32
SMN2-215ENST00000628696 GOLGA8RI6L899 631 aa17.03■□□□□ 0.32
SMN2-215ENST00000628696 EIF1AYO14602 144 aaKnown RBP17.03■□□□□ 0.32
SMN2-215ENST00000628696 SLITRK5O94991 958 aa17.03■□□□□ 0.32
SMN2-215ENST00000628696 UTS2O95399 124 aa17.03■□□□□ 0.32
SMN2-215ENST00000628696 ANGPTL1O95841 491 aa17.03■□□□□ 0.32
SMN2-215ENST00000628696 PLGP00747 810 aaPredicted RBP17.03■□□□□ 0.32
SMN2-215ENST00000628696 FCGR2AP12318 317 aa17.03■□□□□ 0.32
SMN2-215ENST00000628696 LOXP28300 417 aaPredicted RBP17.03■□□□□ 0.32
SMN2-215ENST00000628696 C17orf67Q0P5P2 114 aa17.03■□□□□ 0.32
SMN2-215ENST00000628696 FAM71E1Q6IPT2 247 aa17.03■□□□□ 0.32
SMN2-215ENST00000628696 TIFABQ6ZNK6 161 aa17.03■□□□□ 0.32
SMN2-215ENST00000628696 MMGT1Q8N4V1 131 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms