RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 WRAP53Q9BUR4 548 aaKnown RBP1.81□□□□□ -2.12
TCF4-264ENST00000628391 ZNF426Q9BUY5 554 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 CNPPD1Q9BV87 410 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 SUCNR1Q9BXA5 334 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 AMNQ9BXJ7 453 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 PARD6GQ9BYG4 376 aaPredicted RBP1.81□□□□□ -2.12
TCF4-264ENST00000628391 POTEKPQ9BYX7 375 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 DPH1Q9BZG8 443 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 TM6SF2Q9BZW4 377 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 FAM117AQ9C073 453 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 ADAM19Q9H013 955 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 ARL6Q9H0F7 186 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 C20orf85Q9H1P6 137 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 PCED1AQ9H1Q7 454 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 ABCG5Q9H222 651 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 MTIF3Q9H2K0 278 aaKnown RBP1.81□□□□□ -2.12
TCF4-264ENST00000628391 CRISPLD1Q9H336 500 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 UBQLN3Q9H347 655 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 ABHD16BQ9H3Z7 469 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 RHOJQ9H4E5 214 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 FBXO44Q9H4M3 255 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 METTL17Q9H7H0 456 aaPredicted RBP1.81□□□□□ -2.12
TCF4-264ENST00000628391 KIR3DX1Q9H7L2 352 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 PTGES2Q9H7Z7 377 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 SFXN1Q9H9B4 322 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 LMAN1LQ9HAT1 526 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 GPN1Q9HCN4 374 aaPredicted RBP1.81□□□□□ -2.12
TCF4-264ENST00000628391 LTB4R2Q9NPC1 389 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 CHST11Q9NPF2 352 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 NMRK2Q9NPI5 230 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 SLC52A3Q9NQ40 469 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 LHX9Q9NQ69 397 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 PDLIM7Q9NR12 457 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 TLR8Q9NR97 1041 aaKnown RBP1.81□□□□□ -2.12
TCF4-264ENST00000628391 SPHK2Q9NRA0 654 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.81□□□□□ -2.12
TCF4-264ENST00000628391 FAM212BQ9NTI7 297 aaPredicted RBP1.81□□□□□ -2.12
TCF4-264ENST00000628391 MAN2C1Q9NTJ4 1040 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 ACSS1Q9NUB1 689 aaPredicted RBP1.81□□□□□ -2.12
TCF4-264ENST00000628391 AIG1Q9NVV5 245 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 ZNF358Q9NW07 568 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 RBM22Q9NW64 420 aaKnown RBP eCLIP1.81□□□□□ -2.12
TCF4-264ENST00000628391 TXNL4BQ9NX01 149 aaKnown RBP1.81□□□□□ -2.12
TCF4-264ENST00000628391 FAM120CQ9NX05 1096 aaKnown RBP1.81□□□□□ -2.12
TCF4-264ENST00000628391 TMEM260Q9NX78 707 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 GPR83Q9NYM4 423 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 ZIM2Q9NZV7 527 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 RCC2Q9P258 522 aaKnown RBP1.81□□□□□ -2.12
TCF4-264ENST00000628391 SLC17A6Q9P2U8 582 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 MGAT4CQ9UBM8 478 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 TRPC4Q9UBN4 977 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 RPS6KB2Q9UBS0 482 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 LIMD1Q9UGP4 676 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 APOBEC3BQ9UH17 382 aaKnown RBP1.81□□□□□ -2.12
TCF4-264ENST00000628391 CBLCQ9ULV8 474 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 UBQLN1Q9UMX0 589 aaKnown RBP1.81□□□□□ -2.12
TCF4-264ENST00000628391 SAMD4AQ9UPU9 718 aaKnown RBP1.81□□□□□ -2.12
TCF4-264ENST00000628391 MOKQ9UQ07 419 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 CNTN6Q9UQ52 1028 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 SLC9A8Q9Y2E8 581 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 POFUT2Q9Y2G5 429 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 LSM2Q9Y333 95 aaKnown RBP1.81□□□□□ -2.12
TCF4-264ENST00000628391 FIS1Q9Y3D6 152 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 FBXO7Q9Y3I1 522 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 TMED3Q9Y3Q3 217 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 DYRK1BQ9Y463 629 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 ATG4BQ9Y4P1 393 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 PUS1Q9Y606 427 aaKnown RBP eCLIP1.81□□□□□ -2.12
TCF4-264ENST00000628391 KPTNQ9Y664 436 aa1.81□□□□□ -2.12
TCF4-264ENST00000628391 COL11A1P12107 1806 aaPredicted RBP1.81□□□□□ -2.12
TCF4-264ENST00000628391 GREB1LQ9C091 1923 aaPredicted RBP1.81□□□□□ -2.12
TCF4-264ENST00000628391 THSD7BQ9C0I4 1608 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 COL5A3P25940 1745 aaPredicted RBP1.8□□□□□ -2.12
TCF4-264ENST00000628391 LOC285556D6RIA3 1793 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 GBF1Q92538 1859 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 ANKRD36A6QL64 1941 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 A0A087WUJ7 227 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 FXYD6-FXYD2A0A087WZ82 144 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 CCDC187A0A096LP49 1063 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 A0A096LPI6 279 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 A0A0D9SG52 128 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 KIR2DL5BA0A0G2JN68 375 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 KIR2DL5BA0A0G2JPC4 375 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.8□□□□□ -2.12
TCF4-264ENST00000628391 ABHD14A-ACY1A0A1B0GW23 586 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.8□□□□□ -2.12
TCF4-264ENST00000628391 KDM4FA0A1W2PPD8 638 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 A0A1W2PPE3 182 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 KANTRA0A1W2PQU2 76 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 SLC5A10A0PJK1 596 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 UBE2QL1A1L167 161 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 ELOVL7A1L3X0 281 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 OR5H15A6NDH6 313 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 NAP1L6A6NFF2 107 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 SPDYE2BA6NHP3 402 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 OR5H1A6NKK0 313 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 IFITM10A6NMD0 228 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 DRGXA6NNA5 263 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 ZNF726A6NNF4 738 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 SNRPGP15A8MWD9 76 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms