RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 TANKQ92844 425 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 CACNG6Q9BXT2 260 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 TREX1Q9NSU2 369 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 RPH3AQ9Y2J0 694 aaPredicted RBP12.1□□□□□ -0.47
SCN8A-209ENST00000627620 NOTOA8MTQ0 251 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 C12orf71A8MTZ7 269 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 FOLR3P41439 243 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 EIF2B1Q14232 305 aaKnown RBP12.09□□□□□ -0.47
SCN8A-209ENST00000627620 NANOS1Q8WY41 292 aaKnown RBP12.09□□□□□ -0.47
SCN8A-209ENST00000627620 BIRC8Q96P09 236 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 OR5B2Q96R09 309 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 LHPPQ9H008 270 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 ARL6Q9H0F7 186 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 NPIPA5A0A0B4J1W7 369 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 NPIPA7E9PJI5 369 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 SORBS2O94875 1100 aaKnown RBP12.09□□□□□ -0.47
SCN8A-209ENST00000627620 NPIPA8P0DM63 369 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 IL7P13232 177 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 FUT1P19526 365 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 ETV4P43268 484 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 SLC6A8P48029 635 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 EMP2P54851 167 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 IRF4Q15306 451 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 MARCH8Q5T0T0 291 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 RBM12BQ8IXT5 1001 aaKnown RBP12.09□□□□□ -0.47
SCN8A-209ENST00000627620 FBXO27Q8NI29 283 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 TBC1D15Q8TC07 691 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 RHBDD1Q8TEB9 315 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 FGF13Q92913 245 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 ZMYND19Q96E35 227 aaPredicted RBP12.09□□□□□ -0.47
SCN8A-209ENST00000627620 TOE1Q96GM8 510 aaKnown RBP12.09□□□□□ -0.47
SCN8A-209ENST00000627620 ZNF300Q96RE9 604 aaPredicted RBP12.09□□□□□ -0.47
SCN8A-209ENST00000627620 SORT1Q99523 831 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 TREX2Q9BQ50 279 aaPredicted RBP12.09□□□□□ -0.47
SCN8A-209ENST00000627620 ACPTQ9BZG2 426 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 VDAC3Q9Y277 283 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 SETD1AO15047 1707 aaKnown RBP12.09□□□□□ -0.47
SCN8A-209ENST00000627620 SSX5O60225 188 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 AMY2AP04746 511 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 HMGN2P05204 90 aaKnown RBP12.09□□□□□ -0.47
SCN8A-209ENST00000627620 PRKXP51817 358 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 TRUB1Q8WWH5 349 aaKnown RBP12.09□□□□□ -0.47
SCN8A-209ENST00000627620 TCEAL4Q96EI5 215 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 CLSTN3Q9BQT9 956 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 ALG8Q9BVK2 526 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 VAPAQ9P0L0 249 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 RABL2AQ9UBK7 228 aaPredicted RBP12.09□□□□□ -0.47
SCN8A-209ENST00000627620 RABL2BQ9UNT1 228 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 LDB3O75112 727 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 GPX3P22352 226 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 CRABP1P29762 137 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 TP53I3Q53FA7 332 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 TMEM239Q8WW34 195 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 TM9SF4Q92544 642 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 SFXN2Q96NB2 322 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 CCDC32Q9BV29 185 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 CDH20Q9HBT6 801 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 CCR7P32248 378 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 MAGEA3P43357 314 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 ACTBP60709 375 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 ACTG1P63261 375 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 FGL1Q08830 312 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 PROX2Q3B8N5 592 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 UBE2UQ5VVX9 321 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 SYT14Q8NB59 555 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 NTMT1Q9BV86 223 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 MAN2C1Q9NTJ4 1040 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 SLC39A1Q9NY26 324 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 TAS2R8Q9NYW2 309 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 TMEM181Q9P2C4 612 aa12.09□□□□□ -0.47
SCN8A-209ENST00000627620 RGPD8O14715 1765 aaPredicted RBP12.08□□□□□ -0.48
SCN8A-209ENST00000627620 TRAV18A0A075B6X5 111 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 KIR2DS5A0A0G2JLQ3 304 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 A0A0G2JNG1 304 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 MROH6A6NGR9 719 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 KIR2DS3K7RE56 304 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 FBP2O00757 339 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 LCATP04180 440 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 PTH2RP49190 550 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 KIR2DS5Q14953 304 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 IGFN1Q86VF2 1251 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 ARL14Q8N4G2 192 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 HORMAD2Q8N7B1 307 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 ASCC1Q8N9N2 400 aaKnown RBP12.08□□□□□ -0.48
SCN8A-209ENST00000627620 RCBTB1Q8NDN9 531 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 OR13J1Q8NGT2 312 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 OR5H2Q8NGV7 314 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 SPTSSAQ969W0 71 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 KLHL15Q96M94 604 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 USP36Q9P275 1121 aaKnown RBP12.08□□□□□ -0.48
SCN8A-209ENST00000627620 NAALAD2Q9Y3Q0 740 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 IER3IP1Q9Y5U9 82 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 CSNK1G3Q9Y6M4 447 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 NUP188Q5SRE5 1749 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 LOC285095A0A1B0GVY8 99 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 SLC9B1P1A6NJY1 282 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 GABRR3A8MPY1 467 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 CASC3O15234 703 aaKnown RBP12.08□□□□□ -0.48
SCN8A-209ENST00000627620 ADAMTS4O75173 837 aa12.08□□□□□ -0.48
SCN8A-209ENST00000627620 HTR3BO95264 441 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms