RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 PPP4R1LQ9P1A2 415 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 DCHS2Q6V1P9 2916 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 C2orf72A6NCS6 295 aa20.33■□□□□ 0.85
SF1-220ENST00000626028 KRT16P08779 473 aa20.33■□□□□ 0.85
SF1-220ENST00000626028 CHMP24386 653 aa20.33■□□□□ 0.85
SF1-220ENST00000626028 PRKAG1P54619 331 aa20.33■□□□□ 0.85
SF1-220ENST00000626028 DSCR4P56555 118 aaPredicted RBP20.33■□□□□ 0.85
SF1-220ENST00000626028 MAGOHP61326 146 aaKnown RBP20.33■□□□□ 0.85
SF1-220ENST00000626028 ATG16L1Q676U5 607 aa20.33■□□□□ 0.85
SF1-220ENST00000626028 OGFOD2Q6N063 350 aa20.33■□□□□ 0.85
SF1-220ENST00000626028 AAGABQ6PD74 315 aa20.33■□□□□ 0.85
SF1-220ENST00000626028 BHLHB9Q6PI77 547 aa20.33■□□□□ 0.85
SF1-220ENST00000626028 IFNEQ86WN2 208 aa20.33■□□□□ 0.85
SF1-220ENST00000626028 FADS6Q8N9I5 356 aa20.33■□□□□ 0.85
SF1-220ENST00000626028 OR56A1Q8NGH5 318 aa20.33■□□□□ 0.85
SF1-220ENST00000626028 OR10Q1Q8NGQ4 319 aa20.33■□□□□ 0.85
SF1-220ENST00000626028 FAM110BQ8TC76 370 aa20.33■□□□□ 0.85
SF1-220ENST00000626028 SFXN5Q8TD22 340 aa20.33■□□□□ 0.85
SF1-220ENST00000626028 FAM120BQ96EK7 910 aaKnown RBP20.33■□□□□ 0.85
SF1-220ENST00000626028 G6PC3Q9BUM1 346 aa20.33■□□□□ 0.85
SF1-220ENST00000626028 ENKD1Q9H0I2 346 aa20.33■□□□□ 0.85
SF1-220ENST00000626028 ZCCHC3Q9NUD5 404 aaKnown RBP20.33■□□□□ 0.85
SF1-220ENST00000626028 ALKBH4Q9NXW9 302 aa20.33■□□□□ 0.85
SF1-220ENST00000626028 TAS2R10Q9NYW0 307 aa20.33■□□□□ 0.85
SF1-220ENST00000626028 MED12LQ86YW9 2145 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 A0A0G2JNJ9 132 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 CD8B2A6NJW9 211 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 HSPB2A8KAH6 182 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 SLCO1B7G3V0H7 640 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 LINC01387J3KSC0 135 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 ALOX5P09917 674 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 GFRA1P56159 465 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 C17orf67Q0P5P2 114 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 CASP8Q14790 479 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 HSPB2Q16082 182 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 DPY19L1Q2PZI1 675 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 ACSF3Q4G176 576 aaPredicted RBP20.32■□□□□ 0.84
SF1-220ENST00000626028 NSUN5P2Q63ZY6 315 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 SZRD1Q7Z422 152 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 ANKRD42Q8N9B4 389 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 SLC16A11Q8NCK7 471 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 OR8J2Q8NGG1 315 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 ZPLD1Q8TCW7 415 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 SLC9A6Q92581 669 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 WDYHV1Q96HA8 205 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 TREX2Q9BQ50 279 aaPredicted RBP20.32■□□□□ 0.84
SF1-220ENST00000626028 DUSP26Q9BV47 211 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 TBL1XR1Q9BZK7 514 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 PTGES2Q9H7Z7 377 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 CALHM2Q9HA72 323 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 SLC24A3Q9HC58 644 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 Q9UFV3 132 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 SLC6A5Q9Y345 797 aa20.32■□□□□ 0.84
SF1-220ENST00000626028 ABCA12Q86UK0 2595 aa20.31■□□□□ 0.84
SF1-220ENST00000626028 IGLV3-32A0A0A0MS00 114 aa20.31■□□□□ 0.84
SF1-220ENST00000626028 SNNO75324 88 aaPredicted RBP20.31■□□□□ 0.84
SF1-220ENST00000626028 UTS2O95399 124 aa20.31■□□□□ 0.84
SF1-220ENST00000626028 LBPP18428 481 aa20.31■□□□□ 0.84
SF1-220ENST00000626028 CCT3P49368 545 aaKnown RBP20.31■□□□□ 0.84
SF1-220ENST00000626028 RCAN2Q14206 197 aa20.31■□□□□ 0.84
SF1-220ENST00000626028 SLC25A35Q3KQZ1 300 aa20.31■□□□□ 0.84
SF1-220ENST00000626028 WDR53Q7Z5U6 358 aaPredicted RBP20.31■□□□□ 0.84
SF1-220ENST00000626028 YRDCQ86U90 279 aaKnown RBP20.31■□□□□ 0.84
SF1-220ENST00000626028 KRTCAP2Q8N6L1 136 aa20.31■□□□□ 0.84
SF1-220ENST00000626028 OR4K17Q8NGC6 315 aa20.31■□□□□ 0.84
SF1-220ENST00000626028 TESCQ96BS2 214 aa20.31■□□□□ 0.84
SF1-220ENST00000626028 RMND5BQ96G75 393 aaPredicted RBP20.31■□□□□ 0.84
SF1-220ENST00000626028 BTBD2Q9BX70 525 aa20.31■□□□□ 0.84
SF1-220ENST00000626028 DKKL1Q9UK85 242 aa20.31■□□□□ 0.84
SF1-220ENST00000626028 FBXL2Q9UKC9 423 aa20.31■□□□□ 0.84
SF1-220ENST00000626028 LRBAP50851 2863 aa20.3■□□□□ 0.84
SF1-220ENST00000626028 TRPC5OSA6NMA1 111 aa20.3■□□□□ 0.84
SF1-220ENST00000626028 RNASET2O00584 256 aaKnown RBP20.3■□□□□ 0.84
SF1-220ENST00000626028 KLF11O14901 512 aa20.3■□□□□ 0.84
SF1-220ENST00000626028 HDAC3O15379 428 aa20.3■□□□□ 0.84
SF1-220ENST00000626028 TOXO94900 526 aa20.3■□□□□ 0.84
SF1-220ENST00000626028 KCNK2O95069 426 aa20.3■□□□□ 0.84
SF1-220ENST00000626028 HMGN2P05204 90 aaKnown RBP20.3■□□□□ 0.84
SF1-220ENST00000626028 ACP2P11117 423 aa20.3■□□□□ 0.84
SF1-220ENST00000626028 DPP4P27487 766 aa20.3■□□□□ 0.84
SF1-220ENST00000626028 CEACAM8P31997 349 aaPredicted RBP20.3■□□□□ 0.84
SF1-220ENST00000626028 TFF3Q07654 80 aa20.3■□□□□ 0.84
SF1-220ENST00000626028 BCL2A1Q16548 175 aa20.3■□□□□ 0.84
SF1-220ENST00000626028 DUSP5Q16690 384 aa20.3■□□□□ 0.84
SF1-220ENST00000626028 GLYR1Q49A26 553 aaPredicted RBP20.3■□□□□ 0.84
SF1-220ENST00000626028 AGBL2Q5U5Z8 902 aa20.3■□□□□ 0.84
SF1-220ENST00000626028 CDC73Q6P1J9 531 aa20.3■□□□□ 0.84
SF1-220ENST00000626028 CCDC71Q8IV32 467 aaPredicted RBP20.3■□□□□ 0.84
SF1-220ENST00000626028 VPS37AQ8NEZ2 397 aa20.3■□□□□ 0.84
SF1-220ENST00000626028 GOT1L1Q8NHS2 421 aaPredicted RBP20.3■□□□□ 0.84
SF1-220ENST00000626028 PIK3R3Q92569 461 aa20.3■□□□□ 0.84
SF1-220ENST00000626028 UCN2Q96RP3 112 aa20.3■□□□□ 0.84
SF1-220ENST00000626028 ACTRT3Q9BYD9 372 aa20.3■□□□□ 0.84
SF1-220ENST00000626028 NUF2Q9BZD4 464 aa20.3■□□□□ 0.84
SF1-220ENST00000626028 PIGUQ9H490 435 aa20.3■□□□□ 0.84
SF1-220ENST00000626028 FAF1Q9UNN5 650 aaPredicted RBP20.3■□□□□ 0.84
SF1-220ENST00000626028 CAMK2AQ9UQM7 478 aa20.3■□□□□ 0.84
SF1-220ENST00000626028 SNX8Q9Y5X2 465 aa20.3■□□□□ 0.84
SF1-220ENST00000626028 GXYLT2A0PJZ3 443 aa20.29■□□□□ 0.84
SF1-220ENST00000626028 ALG1L2C9J202 215 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms