RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 A0A1B0GTQ1 180 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 A8MU76 341 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 RGS10O43665 173 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 MRPS14O60783 128 aaKnown RBP12.28□□□□□ -0.44
C3orf56-201ENST00000624688 INMTO95050 263 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 KCNK2O95069 426 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 IGKV1D-16P01601 117 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 CLPSP04118 112 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 DBIP07108 87 aaKnown RBP12.28□□□□□ -0.44
C3orf56-201ENST00000624688 ACVR2AP27037 513 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 POU1F1P28069 291 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 GP2P55259 537 aaKnown RBP12.28□□□□□ -0.44
C3orf56-201ENST00000624688 ALDH6A1Q02252 535 aaKnown RBP12.28□□□□□ -0.44
C3orf56-201ENST00000624688 PLAURQ03405 335 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 TRAM2Q15035 370 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 PLK5Q496M5 336 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 PRAMEF17Q5VTA0 474 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 PRPF38BQ5VTL8 546 aaKnown RBP12.28□□□□□ -0.44
C3orf56-201ENST00000624688 SLX4IPQ5VYV7 408 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 C12orf73Q69YU5 71 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 ZC3H14Q6PJT7 736 aaKnown RBP12.28□□□□□ -0.44
C3orf56-201ENST00000624688 TTLL10Q6ZVT0 673 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 P3H2Q8IVL5 708 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 ZNF420Q8TAQ5 688 aaPredicted RBP12.28□□□□□ -0.44
C3orf56-201ENST00000624688 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.28□□□□□ -0.44
C3orf56-201ENST00000624688 IPCEF1Q8WWN9 437 aaPredicted RBP12.28□□□□□ -0.44
C3orf56-201ENST00000624688 GAB3Q8WWW8 586 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 VSTM2LQ96N03 204 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 MCHR1Q99705 422 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 NUDT22Q9BRQ3 303 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 ANKRD19PQ9H560 264 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 CCNB1IP1Q9NPC3 277 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 POLE3Q9NRF9 147 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 PSORS1C1Q9UIG5 152 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 HEMK1Q9Y5R4 338 aaPredicted RBP12.28□□□□□ -0.44
C3orf56-201ENST00000624688 U3KQA8 63 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 H3BMQ9 156 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 AP3D1O14617 1153 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 BCAS1O75363 584 aaPredicted RBP12.28□□□□□ -0.44
C3orf56-201ENST00000624688 TRMUO75648 421 aaKnown RBP12.28□□□□□ -0.44
C3orf56-201ENST00000624688 NID1P14543 1247 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 OR1D4P47884 311 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 ARL4DP49703 201 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 CDC42P60953 191 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 FUT7Q11130 342 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 ST3GAL3Q11203 375 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 COX10Q12887 443 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 ZNF267Q14586 743 aaPredicted RBP12.28□□□□□ -0.44
C3orf56-201ENST00000624688 EIPR1Q53HC9 387 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 MRPL2Q5T653 305 aaKnown RBP12.28□□□□□ -0.44
C3orf56-201ENST00000624688 NPSR1Q6W5P4 371 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 PLEKHM3Q6ZWE6 761 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 AHSA2Q719I0 299 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 MED25Q71SY5 747 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 PRSS48Q7RTY5 328 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 PRICKLE2Q7Z3G6 844 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 TMPRSS9Q7Z410 1059 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 GDF7Q7Z4P5 450 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 ERI1Q8IV48 349 aaKnown RBP12.28□□□□□ -0.44
C3orf56-201ENST00000624688 NKAIN4Q8IVV8 208 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 OR4N2Q8NGD1 307 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 SAP25Q8TEE9 199 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 GGHQ92820 318 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 PMM1Q92871 262 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 SLC38A4Q969I6 547 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 COG8Q96MW5 612 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 CACYBPQ9HB71 228 aaKnown RBP12.28□□□□□ -0.44
C3orf56-201ENST00000624688 CAPN10Q9HC96 672 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 IMPAD1Q9NX62 359 aa12.28□□□□□ -0.44
C3orf56-201ENST00000624688 DHCR7Q9UBM7 475 aaKnown RBP12.28□□□□□ -0.44
C3orf56-201ENST00000624688 CDHR4A6H8M9 788 aa12.27□□□□□ -0.45
C3orf56-201ENST00000624688 TRIM64BA6NI03 449 aa12.27□□□□□ -0.45
C3orf56-201ENST00000624688 ZNF99A8MXY4 864 aaPredicted RBP12.27□□□□□ -0.45
C3orf56-201ENST00000624688 OR5F1O95221 314 aa12.27□□□□□ -0.45
C3orf56-201ENST00000624688 ATE1O95260 518 aa12.27□□□□□ -0.45
C3orf56-201ENST00000624688 GUSBP08236 651 aa12.27□□□□□ -0.45
C3orf56-201ENST00000624688 MSL3P1P0C860 447 aa12.27□□□□□ -0.45
C3orf56-201ENST00000624688 PRG2P13727 222 aa12.27□□□□□ -0.45
C3orf56-201ENST00000624688 HTR2AP28223 471 aa12.27□□□□□ -0.45
C3orf56-201ENST00000624688 GALNSP34059 522 aa12.27□□□□□ -0.45
C3orf56-201ENST00000624688 RNF144AP50876 292 aaPredicted RBP12.27□□□□□ -0.45
C3orf56-201ENST00000624688 SIGLEC14Q08ET2 396 aa12.27□□□□□ -0.45
C3orf56-201ENST00000624688 MEX3DQ86XN8 651 aaKnown RBP12.27□□□□□ -0.45
C3orf56-201ENST00000624688 KIF18BQ86Y91 864 aa12.27□□□□□ -0.45
C3orf56-201ENST00000624688 KMT5CQ86Y97 462 aa12.27□□□□□ -0.45
C3orf56-201ENST00000624688 FKBP10Q96AY3 582 aa12.27□□□□□ -0.45
C3orf56-201ENST00000624688 MVB12AQ96EY5 273 aa12.27□□□□□ -0.45
C3orf56-201ENST00000624688 SLC41A3Q96GZ6 507 aa12.27□□□□□ -0.45
C3orf56-201ENST00000624688 ZNF768Q9H5H4 540 aaKnown RBP12.27□□□□□ -0.45
C3orf56-201ENST00000624688 AMBNQ9NP70 447 aa12.27□□□□□ -0.45
C3orf56-201ENST00000624688 C11orf16Q9NQ32 467 aa12.27□□□□□ -0.45
C3orf56-201ENST00000624688 ERVK-19Q9WJR5 959 aa12.27□□□□□ -0.45
C3orf56-201ENST00000624688 CLCA1A8K7I4 914 aa12.26□□□□□ -0.45
C3orf56-201ENST00000624688 H3BN98 237 aa12.26□□□□□ -0.45
C3orf56-201ENST00000624688 LAMTOR5O43504 91 aa12.26□□□□□ -0.45
C3orf56-201ENST00000624688 PRAMEF2O60811 474 aa12.26□□□□□ -0.45
C3orf56-201ENST00000624688 SOX30O94993 753 aa12.26□□□□□ -0.45
C3orf56-201ENST00000624688 FADS2O95864 444 aaKnown RBP12.26□□□□□ -0.45
C3orf56-201ENST00000624688 GKN3PP0CG01 181 aa12.26□□□□□ -0.45
C3orf56-201ENST00000624688 PNLIPP16233 465 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms