RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 RNF144AP50876 292 aaPredicted RBP8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 ZNF136P52737 540 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 PDX1P52945 283 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 KIAA1024LP59773 190 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 RAB8AP61006 207 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 EEF1A1P68104 462 aaKnown RBP8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 BTN3A2P78410 334 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 TNFRSF17Q02223 184 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 RGS1Q08116 209 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 DUSP8Q13202 625 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 GPM6BQ13491 265 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 LTB4RQ15722 352 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 PUS10Q3MIT2 529 aaKnown RBP8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 EIPR1Q53HC9 387 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 TJAP1Q5JTD0 557 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 ZNF362Q5T0B9 420 aaPredicted RBP8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 PDZK1Q5T2W1 519 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 LCN1P1Q5VSP4 162 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 TYW3Q6IPR3 259 aaKnown RBP8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 MZT2AQ6P582 158 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 ZNF836Q6ZNA1 936 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 ASPGQ86U10 573 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 MEX3DQ86XN8 651 aaKnown RBP8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 MARCH9Q86YJ5 346 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 RNF113BQ8IZP6 322 aaKnown RBP8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 OR2L13Q8N349 312 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 LRRC25Q8N386 305 aaPredicted RBP8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 OR7G2Q8NG99 324 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 DNAJA4Q8WW22 397 aaPredicted RBP8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 CAPSLQ8WWF8 208 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 SLC7A6Q92536 515 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 KAT2AQ92830 837 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 KLK6Q92876 244 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 TMEM203Q969S6 136 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 DEPDC7Q96QD5 511 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 SERINC2Q96SA4 455 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 PHOX2BQ99453 314 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 ATF6BQ99941 703 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 GDF15Q99988 308 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 TRMT61BQ9BVS5 477 aaKnown RBP8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 C11orf54Q9H0W9 315 aaPredicted RBP8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 EVA1AQ9H8M9 152 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 KRCC1Q9NPI7 259 aaPredicted RBP8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 TOR4AQ9NXH8 423 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 KCMF1Q9P0J7 381 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 PTGFRNQ9P2B2 879 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 ZNF223Q9UK11 482 aaPredicted RBP8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 CLCA2Q9UQC9 943 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 GPR52Q9Y2T5 361 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 GPSM3Q9Y4H4 160 aa8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 SNRNP200O75643 2136 aaKnown RBP8.98□□□□□ -0.97
IGHV3-54-201ENST00000622166 TRAPPC13A5PLN9 417 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 CCDC182A6NF36 153 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 UNC119BA6NIH7 251 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 A8MU76 341 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 ISM1B1AKI9 464 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 GABRPO00591 440 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 TNFSF14O43557 240 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 PIP5K1CO60331 668 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 FCMRO60667 390 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 APOL3O95236 402 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 NTN1O95631 604 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 ZNF888P0CJ79 500 aaPredicted RBP8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 CD53P19397 219 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 NDUFV2P19404 249 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 CPN2P22792 545 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 SOX18P35713 384 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 AVPR1BP47901 424 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 EVX1P49640 407 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 NKX2-5P52952 324 aaPredicted RBP8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 MLLT1Q03111 559 aaPredicted RBP8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 TAB1Q15750 504 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 PYDC2Q56P42 97 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 FHL5Q5TD97 284 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 SLC30A6Q6NXT4 461 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 FBXO42Q6P3S6 717 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 FAM111BQ6SJ93 734 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 ZNF322Q6U7Q0 402 aaPredicted RBP8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 USP53Q70EK8 1073 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 GET4Q7L5D6 327 aaPredicted RBP8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 LHFPL3Q86UP9 236 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 AMIGO1Q86WK6 493 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 GID4Q8IVV7 300 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 NRMQ8IXM6 262 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 YAF2Q8IY57 180 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 SYT14Q8NB59 555 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 OR2T33Q8NG76 320 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 OR4F15Q8NGB8 312 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 OR4K14Q8NGD5 310 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 FLVCR1-AS1Q8TAF5 88 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 SPRYD4Q8WW59 207 aaPredicted RBP8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 ACOT12Q8WYK0 555 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 PMM1Q92871 262 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 CDS1Q92903 461 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 RNF170Q96K19 258 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 RIPOR3Q96MK2 946 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 OR2M4Q96R27 311 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 SDF2Q99470 211 aa8.97□□□□□ -0.97
IGHV3-54-201ENST00000622166 TM9SF2Q99805 663 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms