RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 H0Y8X5 98 aa8.8□□□□□ -1
PDPN-212ENST00000621990 PLD2O14939 933 aa8.8□□□□□ -1
PDPN-212ENST00000621990 B3GALT2O43825 422 aa8.8□□□□□ -1
PDPN-212ENST00000621990 ATP6V1G1O75348 118 aa8.8□□□□□ -1
PDPN-212ENST00000621990 DLGAP3O95886 979 aa8.8□□□□□ -1
PDPN-212ENST00000621990 CPMP14384 443 aa8.8□□□□□ -1
PDPN-212ENST00000621990 GNSP15586 552 aa8.8□□□□□ -1
PDPN-212ENST00000621990 CTHP32929 405 aa8.8□□□□□ -1
PDPN-212ENST00000621990 MAP4K2Q12851 820 aa8.8□□□□□ -1
PDPN-212ENST00000621990 SHHQ15465 462 aa8.8□□□□□ -1
PDPN-212ENST00000621990 ZNF79Q15937 498 aa8.8□□□□□ -1
PDPN-212ENST00000621990 GLYR1Q49A26 553 aaPredicted RBP8.8□□□□□ -1
PDPN-212ENST00000621990 EIPR1Q53HC9 387 aa8.8□□□□□ -1
PDPN-212ENST00000621990 OR2G6Q5TZ20 316 aa8.8□□□□□ -1
PDPN-212ENST00000621990 CCBE1Q6UXH8 406 aaPredicted RBP8.8□□□□□ -1
PDPN-212ENST00000621990 PLEKHM3Q6ZWE6 761 aa8.8□□□□□ -1
PDPN-212ENST00000621990 TRIM73Q86UV7 250 aa8.8□□□□□ -1
PDPN-212ENST00000621990 PEX5LQ8IYB4 626 aa8.8□□□□□ -1
PDPN-212ENST00000621990 SIMC1Q8NDZ2 872 aa8.8□□□□□ -1
PDPN-212ENST00000621990 GPR151Q8TDV0 419 aa8.8□□□□□ -1
PDPN-212ENST00000621990 TMCO6Q96DC7 493 aa8.8□□□□□ -1
PDPN-212ENST00000621990 SIPA1Q96FS4 1042 aa8.8□□□□□ -1
PDPN-212ENST00000621990 MRGPRX1Q96LB2 322 aa8.8□□□□□ -1
PDPN-212ENST00000621990 CEP19Q96LK0 163 aa8.8□□□□□ -1
PDPN-212ENST00000621990 SDF2Q99470 211 aa8.8□□□□□ -1
PDPN-212ENST00000621990 MCHR1Q99705 422 aa8.8□□□□□ -1
PDPN-212ENST00000621990 TMEM168Q9H0V1 697 aa8.8□□□□□ -1
PDPN-212ENST00000621990 PIGUQ9H490 435 aa8.8□□□□□ -1
PDPN-212ENST00000621990 IL21RQ9HBE5 538 aa8.8□□□□□ -1
PDPN-212ENST00000621990 SNTG1Q9NSN8 517 aa8.8□□□□□ -1
PDPN-212ENST00000621990 PLEKHB1Q9UF11 243 aaPredicted RBP8.8□□□□□ -1
PDPN-212ENST00000621990 NCKAP1Q9Y2A7 1128 aa8.8□□□□□ -1
PDPN-212ENST00000621990 WDR45Q9Y484 360 aa8.8□□□□□ -1
PDPN-212ENST00000621990 SPIN1Q9Y657 262 aaPredicted RBP8.8□□□□□ -1
PDPN-212ENST00000621990 CDH10Q9Y6N8 788 aa8.8□□□□□ -1
PDPN-212ENST00000621990 SCN3AQ9NY46 2000 aa8.79□□□□□ -1
PDPN-212ENST00000621990 J3QRE1 110 aa8.79□□□□□ -1
PDPN-212ENST00000621990 DNAJB6O75190 326 aa8.79□□□□□ -1
PDPN-212ENST00000621990 ZNF10P21506 573 aaPredicted RBP8.79□□□□□ -1
PDPN-212ENST00000621990 HNRNPA2B1P22626 353 aaKnown RBP8.79□□□□□ -1
PDPN-212ENST00000621990 HTR1FP30939 366 aa8.79□□□□□ -1
PDPN-212ENST00000621990 TLX1P31314 330 aaPredicted RBP8.79□□□□□ -1
PDPN-212ENST00000621990 MAP3K8P41279 467 aa8.79□□□□□ -1
PDPN-212ENST00000621990 ACTR1BP42025 376 aa8.79□□□□□ -1
PDPN-212ENST00000621990 ACTR1AP61163 376 aa8.79□□□□□ -1
PDPN-212ENST00000621990 HOXC5Q00444 222 aa8.79□□□□□ -1
PDPN-212ENST00000621990 RUNX1T1Q06455 604 aa8.79□□□□□ -1
PDPN-212ENST00000621990 PGGHGQ32M88 737 aa8.79□□□□□ -1
PDPN-212ENST00000621990 DEFB134Q4QY38 66 aa8.79□□□□□ -1
PDPN-212ENST00000621990 PRRT3Q5FWE3 981 aa8.79□□□□□ -1
PDPN-212ENST00000621990 NXNL2Q5VZ03 156 aa8.79□□□□□ -1
PDPN-212ENST00000621990 TMPRSS11AQ6ZMR5 421 aa8.79□□□□□ -1
PDPN-212ENST00000621990 ABHD13Q7L211 337 aa8.79□□□□□ -1
PDPN-212ENST00000621990 RRM2BQ7LG56 351 aa8.79□□□□□ -1
PDPN-212ENST00000621990 LAX1Q8IWV1 398 aa8.79□□□□□ -1
PDPN-212ENST00000621990 NRMQ8IXM6 262 aa8.79□□□□□ -1
PDPN-212ENST00000621990 CAMKVQ8NCB2 501 aa8.79□□□□□ -1
PDPN-212ENST00000621990 TMEM255BQ8WV15 326 aa8.79□□□□□ -1
PDPN-212ENST00000621990 UFD1Q92890 307 aa8.79□□□□□ -1
PDPN-212ENST00000621990 TSACCQ96A04 125 aaPredicted RBP8.79□□□□□ -1
PDPN-212ENST00000621990 KCTD7Q96MP8 289 aa8.79□□□□□ -1
PDPN-212ENST00000621990 PRSS27Q9BQR3 290 aa8.79□□□□□ -1
PDPN-212ENST00000621990 SRRQ9GZT4 340 aa8.79□□□□□ -1
PDPN-212ENST00000621990 DUSP22Q9NRW4 184 aa8.79□□□□□ -1
PDPN-212ENST00000621990 SACM1LQ9NTJ5 587 aa8.79□□□□□ -1
PDPN-212ENST00000621990 TMEM74BQ9NUR3 256 aa8.79□□□□□ -1
PDPN-212ENST00000621990 ERVK13-1Q9NX77 482 aa8.79□□□□□ -1
PDPN-212ENST00000621990 ACTR10Q9NZ32 417 aa8.79□□□□□ -1
PDPN-212ENST00000621990 CLEC1BQ9P126 229 aa8.79□□□□□ -1
PDPN-212ENST00000621990 ZNF232Q9UNY5 417 aa8.79□□□□□ -1
PDPN-212ENST00000621990 CA5BQ9Y2D0 317 aa8.79□□□□□ -1
PDPN-212ENST00000621990 NTNG1Q9Y2I2 539 aa8.79□□□□□ -1
PDPN-212ENST00000621990 CMAHPQ9Y471 501 aa8.79□□□□□ -1
PDPN-212ENST00000621990 GOLGA4Q13439 2230 aaKnown RBP8.79□□□□□ -1
PDPN-212ENST00000621990 CENPVL1A0A0U1RR11 272 aa8.79□□□□□ -1
PDPN-212ENST00000621990 SNPHO15079 494 aa8.79□□□□□ -1
PDPN-212ENST00000621990 SEC14L5O43304 696 aa8.79□□□□□ -1
PDPN-212ENST00000621990 PLOD3O60568 738 aa8.79□□□□□ -1
PDPN-212ENST00000621990 FMO6PO60774 539 aa8.79□□□□□ -1
PDPN-212ENST00000621990 CDRT1O95170 752 aa8.79□□□□□ -1
PDPN-212ENST00000621990 LYPD3O95274 346 aa8.79□□□□□ -1
PDPN-212ENST00000621990 TSPAN19P0C672 248 aa8.79□□□□□ -1
PDPN-212ENST00000621990 SLC1A3P43003 542 aa8.79□□□□□ -1
PDPN-212ENST00000621990 SLC9A3P48764 834 aa8.79□□□□□ -1
PDPN-212ENST00000621990 CDH11P55287 796 aa8.79□□□□□ -1
PDPN-212ENST00000621990 YPEL5P62699 121 aa8.79□□□□□ -1
PDPN-212ENST00000621990 RPS25P62851 125 aaKnown RBP8.79□□□□□ -1
PDPN-212ENST00000621990 SIM1P81133 766 aaPredicted RBP8.79□□□□□ -1
PDPN-212ENST00000621990 MLLT1Q03111 559 aaPredicted RBP8.79□□□□□ -1
PDPN-212ENST00000621990 GPR18Q14330 331 aa8.79□□□□□ -1
PDPN-212ENST00000621990 CLEC12AQ5QGZ9 265 aa8.79□□□□□ -1
PDPN-212ENST00000621990 MANEAQ5SRI9 462 aa8.79□□□□□ -1
PDPN-212ENST00000621990 SLC30A6Q6NXT4 461 aa8.79□□□□□ -1
PDPN-212ENST00000621990 ZCCHC12Q6PEW1 402 aa8.79□□□□□ -1
PDPN-212ENST00000621990 FIGLAQ6QHK4 219 aa8.79□□□□□ -1
PDPN-212ENST00000621990 HSDL2Q6YN16 418 aa8.79□□□□□ -1
PDPN-212ENST00000621990 ARIH2OSQ8N7S6 290 aa8.79□□□□□ -1
PDPN-212ENST00000621990 IL17RDQ8NFM7 739 aa8.79□□□□□ -1
PDPN-212ENST00000621990 OR2T33Q8NG76 320 aa8.79□□□□□ -1
PDPN-212ENST00000621990 BRIX1Q8TDN6 353 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms