RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 B3GNT8Q7Z7M8 397 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 OR4N2Q8NGD1 307 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 FKBP10Q96AY3 582 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 PRR14Q9BWN1 585 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 YTHDF1Q9BYJ9 559 aaKnown RBP19.9■□□□□ 0.78
SPAST-204ENST00000621856 OR8D2Q9GZM6 311 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 VN1R1Q9GZP7 353 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 SLC22A11Q9NSA0 550 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 MUC3AQ02505 3323 aa19.89■□□□□ 0.77
SPAST-204ENST00000621856 A0A1W2PRQ8 180 aa19.89■□□□□ 0.77
SPAST-204ENST00000621856 CPSF4LA6NMK7 179 aaKnown RBP19.89■□□□□ 0.77
SPAST-204ENST00000621856 OR10H3O60404 316 aa19.89■□□□□ 0.77
SPAST-204ENST00000621856 NID1P14543 1247 aa19.89■□□□□ 0.77
SPAST-204ENST00000621856 ELK4P28324 431 aa19.89■□□□□ 0.77
SPAST-204ENST00000621856 OCA2Q04671 838 aa19.89■□□□□ 0.77
SPAST-204ENST00000621856 DGCR6Q14129 220 aa19.89■□□□□ 0.77
SPAST-204ENST00000621856 SEC23BQ15437 767 aa19.89■□□□□ 0.77
SPAST-204ENST00000621856 ZAR1Q86SH2 424 aa19.89■□□□□ 0.77
SPAST-204ENST00000621856 LAPTM4BQ86VI4 370 aa19.89■□□□□ 0.77
SPAST-204ENST00000621856 TSPYL5Q86VY4 417 aaPredicted RBP19.89■□□□□ 0.77
SPAST-204ENST00000621856 SLC38A9Q8NBW4 561 aa19.89■□□□□ 0.77
SPAST-204ENST00000621856 APOL4Q9BPW4 351 aa19.89■□□□□ 0.77
SPAST-204ENST00000621856 ARMC7Q9H6L4 198 aa19.89■□□□□ 0.77
SPAST-204ENST00000621856 APMAPQ9HDC9 416 aa19.89■□□□□ 0.77
SPAST-204ENST00000621856 GALR2O43603 387 aaPredicted RBP19.88■□□□□ 0.77
SPAST-204ENST00000621856 GASTP01350 101 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 RNF144AP50876 292 aaPredicted RBP19.88■□□□□ 0.77
SPAST-204ENST00000621856 EFNA3P52797 238 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 HOXC5Q00444 222 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 APOFQ13790 326 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 MRPL2Q5T653 305 aaKnown RBP19.88■□□□□ 0.77
SPAST-204ENST00000621856 PODNL1Q6PEZ8 512 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 PLEKHM3Q6ZWE6 761 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 ZNF321PQ8N8H1 164 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 STT3BQ8TCJ2 826 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 SLC2A12Q8TD20 617 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 MCHR1Q99705 422 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 KCNE5Q9UJ90 142 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 MGAT4BQ9UQ53 548 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 ASCC3Q8N3C0 2202 aaKnown RBP19.88■□□□□ 0.77
SPAST-204ENST00000621856 RALGAPA1Q6GYQ0 2036 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 SH3PXD2BA1X283 911 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 IGKV1D-16P01601 117 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 GP1BAP07359 652 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 GUSBP08236 651 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 CT45A8P0DMV1 189 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 CT45A9P0DMV2 189 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 ACP1P24666 158 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 EPHA2P29317 976 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 RYKP34925 604 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 RORAP35398 523 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 UGT2B15P54855 530 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 CDH15P55291 814 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 RPP38P78345 283 aaKnown RBP19.88■□□□□ 0.77
SPAST-204ENST00000621856 DCDP81605 110 aaKnown RBP19.88■□□□□ 0.77
SPAST-204ENST00000621856 CD47Q08722 323 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 MEP1AQ16819 746 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 CT45A2Q5DJT8 189 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 RNF220Q5VTB9 566 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 ZNF770Q6IQ21 691 aaPredicted RBP19.88■□□□□ 0.77
SPAST-204ENST00000621856 DBX2Q6ZNG2 339 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 SHISA6Q6ZSJ9 500 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 BPHLQ86WA6 291 aaPredicted RBP19.88■□□□□ 0.77
SPAST-204ENST00000621856 ZNF614Q8N883 585 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 AGBL5Q8NDL9 886 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 OR14A16Q8NHC5 309 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 SLC7A13Q8TCU3 470 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 ART5Q96L15 291 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 CTRCQ99895 268 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 FUZQ9BT04 418 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 G6PC3Q9BUM1 346 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 TGIF2Q9GZN2 237 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 ENOPH1Q9UHY7 261 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 NDRG4Q9ULP0 352 aaKnown RBP19.88■□□□□ 0.77
SPAST-204ENST00000621856 CBLCQ9ULV8 474 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 CFL2Q9Y281 166 aa19.88■□□□□ 0.77
SPAST-204ENST00000621856 ADAP00813 363 aa19.87■□□□□ 0.77
SPAST-204ENST00000621856 SLC37A1P57057 533 aa19.87■□□□□ 0.77
SPAST-204ENST00000621856 CTU2Q2VPK5 515 aaKnown RBP19.87■□□□□ 0.77
SPAST-204ENST00000621856 ENTPD8Q5MY95 495 aa19.87■□□□□ 0.77
SPAST-204ENST00000621856 RANBP3LQ86VV4 465 aaPredicted RBP19.87■□□□□ 0.77
SPAST-204ENST00000621856 PLPP5Q8NEB5 264 aa19.87■□□□□ 0.77
SPAST-204ENST00000621856 DAZLQ92904 295 aaKnown RBP19.87■□□□□ 0.77
SPAST-204ENST00000621856 SLC46A1Q96NT5 459 aa19.87■□□□□ 0.77
SPAST-204ENST00000621856 PITX2Q99697 317 aa19.87■□□□□ 0.77
SPAST-204ENST00000621856 ADNPQ9H2P0 1102 aa19.87■□□□□ 0.77
SPAST-204ENST00000621856 MAN2C1Q9NTJ4 1040 aa19.87■□□□□ 0.77
SPAST-204ENST00000621856 SYNDIG1LA6NDD5 238 aa19.86■□□□□ 0.77
SPAST-204ENST00000621856 CYP7B1O75881 506 aa19.86■□□□□ 0.77
SPAST-204ENST00000621856 DDAH2O95865 285 aa19.86■□□□□ 0.77
SPAST-204ENST00000621856 ZGLP1P0C6A0 271 aa19.86■□□□□ 0.77
SPAST-204ENST00000621856 FGF5P12034 268 aa19.86■□□□□ 0.77
SPAST-204ENST00000621856 ISL1P61371 349 aa19.86■□□□□ 0.77
SPAST-204ENST00000621856 ZFP36L1Q07352 338 aaKnown RBP19.86■□□□□ 0.77
SPAST-204ENST00000621856 ST3GAL3Q11203 375 aa19.86■□□□□ 0.77
SPAST-204ENST00000621856 IL11RAQ14626 422 aa19.86■□□□□ 0.77
SPAST-204ENST00000621856 TRAM2Q15035 370 aa19.86■□□□□ 0.77
SPAST-204ENST00000621856 RBM48Q5RL73 367 aaKnown RBP19.86■□□□□ 0.77
SPAST-204ENST00000621856 FAAH2Q6GMR7 532 aa19.86■□□□□ 0.77
SPAST-204ENST00000621856 LAIR1Q6GTX8 287 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms