RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 GKN3PP0CG01 181 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 CBLP22681 906 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 POU6F2P78424 691 aaPredicted RBP9.25□□□□□ -0.93
VTA1-205ENST00000620996 ITGADQ13349 1161 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 GRM7Q14831 915 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 PRICKLE4Q2TBC4 344 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 OR4K5Q8NGD3 323 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.25□□□□□ -0.93
VTA1-205ENST00000620996 APOBEC4Q8WW27 367 aaKnown RBP9.25□□□□□ -0.93
VTA1-205ENST00000620996 DNASE2BQ8WZ79 361 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 ISOC1Q96CN7 298 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 NECAB3Q96P71 396 aaPredicted RBP9.25□□□□□ -0.93
VTA1-205ENST00000620996 MCHR1Q99705 422 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 LHPPQ9H008 270 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 RBM38Q9H0Z9 239 aaKnown RBP9.25□□□□□ -0.93
VTA1-205ENST00000620996 DUSP15Q9H1R2 295 aaPredicted RBP9.25□□□□□ -0.93
VTA1-205ENST00000620996 OR10H1Q9Y4A9 318 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.25□□□□□ -0.93
VTA1-205ENST00000620996 RGS10O43665 173 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 STX11O75558 287 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 MT-ND2P03891 347 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 CHMP24386 653 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 CNR2P34972 360 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 CRISP1P54107 249 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 LPAL2Q16609 132 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 TCTE1Q5JU00 501 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 TYW3Q6IPR3 259 aaKnown RBP9.25□□□□□ -0.93
VTA1-205ENST00000620996 DCDC5Q6ZRR9 648 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 USP43Q70EL4 1123 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 PLXDC1Q8IUK5 500 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 SLC38A4Q969I6 547 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 HRASLS5Q96KN8 279 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 PRRC1Q96M27 445 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 PTCHD1Q96NR3 888 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 SDF2Q99470 211 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 MTHFD2LQ9H903 347 aaPredicted RBP9.25□□□□□ -0.93
VTA1-205ENST00000620996 CUTCQ9NTM9 273 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 WDR70Q9NW82 654 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 SLC6A14Q9UN76 642 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 ERVK-19Q9WJR5 959 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 ASXL3Q9C0F0 2248 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 THADAQ6YHU6 1953 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 INMTO95050 263 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 HTR1AP08908 422 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 SLC35E2P0CK97 266 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 UBL4AP11441 157 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 GABARAPL2P60520 117 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 BNC1Q01954 994 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 FLYWCH1Q4VC44 716 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 PGBD2Q6P3X8 592 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 CASP12Q6UXS9 341 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 ZNF836Q6ZNA1 936 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 OR6C4Q8NGE1 309 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 OR2I1PQ8NGU4 316 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 RORBQ92753 470 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 CCDC74AQ96AQ1 378 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 NUDT22Q9BRQ3 303 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 TWSG1Q9GZX9 223 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 PIGUQ9H490 435 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 CNIH4Q9P003 139 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 ENOPH1Q9UHY7 261 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 KCND3Q9UK17 655 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 MGAT4BQ9UQ53 548 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 KPNA4O00629 521 aaPredicted RBP9.24□□□□□ -0.93
VTA1-205ENST00000620996 NSA2O95478 260 aaKnown RBP9.24□□□□□ -0.93
VTA1-205ENST00000620996 CCDC159P0C7I6 412 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 CD1CP29017 333 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 HSD11B2P80365 405 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 INAVAQ3KP66 663 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 ARHGAP11BQ3KRB8 267 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 ENTPD8Q5MY95 495 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 PERM1Q5SV97 790 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 STX19Q8N4C7 294 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 OR4N2Q8NGD1 307 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 ADAMTS16Q8TE57 1224 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 C12orf43Q96C57 262 aaKnown RBP9.24□□□□□ -0.93
VTA1-205ENST00000620996 DPYSL5Q9BPU6 564 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 COPS4Q9BT78 406 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 UCK1Q9HA47 277 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 SEMA4GQ9NTN9 838 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 TMEM184BQ9Y519 407 aaPredicted RBP9.24□□□□□ -0.93
VTA1-205ENST00000620996 LINC00854A0A1B0GVQ3 168 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 ADAP00813 363 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 GLB1P16278 677 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 TRHRP34981 398 aaPredicted RBP9.24□□□□□ -0.93
VTA1-205ENST00000620996 LIMS1P48059 325 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 HMGA2P52926 109 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 LSM3P62310 102 aaKnown RBP9.24□□□□□ -0.93
VTA1-205ENST00000620996 MAP4K2Q12851 820 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 MAPK14Q16539 360 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 PROX2Q3B8N5 592 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 CLEC12AQ5QGZ9 265 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 OGFOD3Q6PK18 319 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 SHISA6Q6ZSJ9 500 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 RCBTB1Q8NDN9 531 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 GRHL3Q8TE85 626 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 FAM46AQ96IP4 442 aaKnown RBP9.24□□□□□ -0.93
VTA1-205ENST00000620996 PITX2Q99697 317 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 NDC1Q9BTX1 674 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 GPR83Q9NYM4 423 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms