RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644		A0A1W2PRQ8	180 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	PRODH	O43272	600 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	CHP2	O43745	196 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	PAPLN	O95428	1278 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	LALBA	P00709	142 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	ITGB8	P26012	769 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	RFX3	P48380	749 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	CLDN2	P57739	230 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	PLK5	Q496M5	336 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	PLEKHM3	Q6ZWE6	761 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	BBS1	Q8NFJ9	593 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	OR51G2	Q8NGK0	314 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	OR8D4	Q8NGM9	314 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	DACT3	Q96B18	629 aa	Predicted RBP	13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	SECISBP2	Q96T21	854 aa	Known RBP	13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	AIFM2	Q9BRQ8	373 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	FAIM2	Q9BWQ8	316 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	PIGU	Q9H490	435 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	MAN2C1	Q9NTJ4	1040 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	ZNF224	Q9NZL3	707 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	RABL2B	Q9UNT1	228 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	GPR55	Q9Y2T6	319 aa	Predicted RBP	13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	TSPAN11	A1L157	253 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	GTPBP1	O00178	669 aa	Known RBP	13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	ACP2	P11117	423 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	MC3R	P41968	323 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	CTBP2	P56545	445 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	RGS8	P57771	180 aa	Predicted RBP	13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	RPS7	P62081	194 aa	Known RBP	13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	COX10	Q12887	443 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	KLHL12	Q53G59	568 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	IDNK	Q5T6J7	187 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	RNLS	Q5VYX0	342 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	IL20RB	Q6UXL0	311 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	ZNF793	Q6ZN11	406 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	GANC	Q8TET4	914 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	CREB3L1	Q96BA8	519 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	DEC1	Q9P2X7	70 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	ING4	Q9UNL4	249 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	ATG4B	Q9Y4P1	393 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	DOCK9	Q9BZ29	2069 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644		A0A0A6YYJ9	748 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	RPN2	P04844	631 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	TAS2R38	P59533	333 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	QSOX2	Q6ZRP7	698 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	DGLUCY	Q7Z3D6	616 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	DNAJC5G	Q8N7S2	189 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	OR5K2	Q8NHB8	316 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	ZFPM2	Q8WW38	1151 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	PRRC1	Q96M27	445 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	FAM83C	Q9BQN1	747 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	NDOR1	Q9UHB4	597 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	NCKAP1	Q9Y2A7	1128 aa		13.56	□□□□□ -0.24
SMTN-223	ENST00000619644	ZC3H12D	A2A288	527 aa	Known RBP	13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	DVL2	O14641	736 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	HR	O43593	1189 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	PAK4	O96013	591 aa	Predicted RBP	13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	RAF1	P04049	648 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	CERS1	P27544	350 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	EVX1	P49640	407 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	TGM3	Q08188	693 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	UBE3D	Q7Z6J8	389 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	NKAIN4	Q8IVV8	208 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	NRM	Q8IXM6	262 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	C12orf76	Q8N812	135 aa	Predicted RBP	13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	LINC01555	Q8NAE3	123 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	OR9A2	Q8NGT5	310 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	SUSD6	Q92537	303 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	VWCE	Q96DN2	955 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	PPP1R16A	Q96I34	528 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	ZFP64	Q9NPA5	681 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	SEMA4G	Q9NTN9	838 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	NOTCH4	Q99466	2003 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	C17orf113	A0A1B0GUU1	675 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	SDHB	P21912	280 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	CTNNB1	P35222	781 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	DUSP2	Q05923	314 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	SNTA1	Q13424	505 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	SUZ12	Q15022	739 aa	Known RBP	13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	LTB4R	Q15722	352 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	BCL2L15	Q5TBC7	163 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	ERN2	Q76MJ5	926 aa	Known RBP	13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	PMEPA1	Q969W9	287 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	TTTY10	Q9BZA0	68 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	MED28	Q9H204	178 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	MED20	Q9H944	212 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	KLHL1	Q9NR64	748 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	UCKL1	Q9NWZ5	548 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	ZNF222	Q9UK12	451 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	GPR34	Q9UPC5	381 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	SF3B6	Q9Y3B4	125 aa	Known RBP	13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	PLEKHM1	Q9Y4G2	1056 aa		13.55	□□□□□ -0.24
SMTN-223	ENST00000619644	TRBV23OR9-2	A0A075B6M9	112 aa		13.54	□□□□□ -0.24
SMTN-223	ENST00000619644	SGK494	L7N484	410 aa		13.54	□□□□□ -0.24
SMTN-223	ENST00000619644	TSPAN4	O14817	238 aa		13.54	□□□□□ -0.24
SMTN-223	ENST00000619644	AKAP8	O43823	692 aa	Known RBP	13.54	□□□□□ -0.24
SMTN-223	ENST00000619644	PIP5K1C	O60331	668 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms