RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 CXorf36Q9H7Y0 433 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 MANSC1Q9H8J5 431 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 NEUROD4Q9HD90 331 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 NTMQ9P121 344 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 PPP4R1LQ9P1A2 415 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 SLC6A5Q9Y345 797 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 FREM3P0C091 2139 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 NAV3Q8IVL0 2385 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 CACNA1CQ13936 2221 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 C17orf51A8MQB3 221 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 HDAC3O15379 428 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 CFLARO15519 480 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 WDR1O75083 606 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 NKX2-2O95096 273 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 H2AFXP16104 143 aaPredicted RBP14.56□□□□□ -0.08
BRCA1-228ENST00000618469 AGAP20933 346 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 PRIM2P49643 509 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 OCRLQ01968 901 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 CRYZQ08257 329 aaKnown RBP14.56□□□□□ -0.08
BRCA1-228ENST00000618469 LASP1Q14847 261 aaKnown RBP14.56□□□□□ -0.08
BRCA1-228ENST00000618469 DUSP5Q16690 384 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 LSM12Q3MHD2 195 aaKnown RBP14.56□□□□□ -0.08
BRCA1-228ENST00000618469 TMEM211Q6ICI0 200 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 OR5M10Q6IEU7 315 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 OR4F3Q6IEY1 312 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 HDXQ7Z353 690 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 CAMKMTQ7Z624 323 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 YRDCQ86U90 279 aaKnown RBP14.56□□□□□ -0.08
BRCA1-228ENST00000618469 PLCZ1Q86YW0 608 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 LRRC34Q8IZ02 419 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 GOLGA6L1Q8N7Z2 621 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 COX18Q8N8Q8 333 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 WDSUB1Q8N9V3 476 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 SLC16A11Q8NCK7 471 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 HOXB13Q92826 284 aaPredicted RBP14.56□□□□□ -0.08
BRCA1-228ENST00000618469 SDCCAG3Q96C92 435 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 C16orf58Q96GQ5 468 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 CHST11Q9NPF2 352 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 ALKBH4Q9NXW9 302 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 COQ3Q9NZJ6 369 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 DKKL1Q9UK85 242 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 FBXL2Q9UKC9 423 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 ABCG2Q9UNQ0 655 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 FAM215AQ9Y5M1 114 aa14.56□□□□□ -0.08
BRCA1-228ENST00000618469 PHF3Q92576 2039 aaKnown RBP14.56□□□□□ -0.08
BRCA1-228ENST00000618469 GOLGA8QA0A0J9YX86 632 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 GOLGA8OA6NCC3 632 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 TRPC5OSA6NMA1 111 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 GOLGA8NF8WBI6 632 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 UTS2O95399 124 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 IGKV1D-16P01601 117 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 HMGN2P05204 90 aaKnown RBP14.55□□□□□ -0.08
BRCA1-228ENST00000618469 ALOX5P09917 674 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 ALDOCP09972 364 aaKnown RBP14.55□□□□□ -0.08
BRCA1-228ENST00000618469 MAP3K8P41279 467 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 GAS1P54826 345 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 NUP107P57740 925 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 DCST1Q5T197 706 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 C1orf185Q5T7R7 199 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 OGFOD2Q6N063 350 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 B3GNT6Q6ZMB0 384 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 CLECL1Q8IZS7 167 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 OR4K17Q8NGC6 315 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 OR56A1Q8NGH5 318 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 OR5AK3PQ8NH89 298 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 OR14L1PQ8NHC6 308 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 PSMA8Q8TAA3 256 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 SFXN5Q8TD22 340 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 OR2B2Q9GZK3 357 aa14.55□□□□□ -0.08
BRCA1-228ENST00000618469 WDR55Q9H6Y2 383 aaPredicted RBP14.55□□□□□ -0.08
BRCA1-228ENST00000618469 FAM120CQ9NX05 1096 aaKnown RBP14.55□□□□□ -0.08
BRCA1-228ENST00000618469 SLCO1B7G3V0H7 640 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 FADS1O60427 444 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 CBR3O75828 277 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 CLDN14O95500 239 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 GABRA1P14867 456 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 TCEA1P23193 301 aaKnown RBP14.54□□□□□ -0.08
BRCA1-228ENST00000618469 EPHA3P29320 983 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 GCKP35557 465 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 KIR3DL1P43629 444 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 CCT3P49368 545 aaKnown RBP14.54□□□□□ -0.08
BRCA1-228ENST00000618469 CLNS1AP54105 237 aaKnown RBP14.54□□□□□ -0.08
BRCA1-228ENST00000618469 NME5P56597 212 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 HBA1P69905 142 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 PMPCAQ10713 525 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 GRAMD1BQ3KR37 738 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 RTL6Q6ICC9 239 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 ZCCHC12Q6PEW1 402 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 FIGNL1Q6PIW4 674 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 ACAD11Q709F0 780 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 CDH24Q86UP0 819 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 WDR75Q8IWA0 830 aaKnown RBP14.54□□□□□ -0.08
BRCA1-228ENST00000618469 ULK2Q8IYT8 1036 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 CA5BP1Q8WTZ4 195 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 RND1Q92730 232 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 CDS1Q92903 461 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 DTNBP1Q96EV8 351 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 SH3GL2Q99962 352 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 UGT2B28Q9BY64 529 aa14.54□□□□□ -0.08
BRCA1-228ENST00000618469 TBL1XR1Q9BZK7 514 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms