RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 B4GAT1O43505 415 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 RAB40ALP0C0E4 278 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 DSC2Q02487 901 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 EMX1Q04741 257 aaPredicted RBP14.28□□□□□ -0.12
COL5A1-208ENST00000618395 ZNF266Q14584 549 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 PDLIM3Q53GG5 364 aaPredicted RBP14.28□□□□□ -0.12
COL5A1-208ENST00000618395 VARS2Q5ST30 1063 aaKnown RBP14.28□□□□□ -0.12
COL5A1-208ENST00000618395 CD276Q5ZPR3 534 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 VASH1Q7L8A9 365 aaPredicted RBP14.28□□□□□ -0.12
COL5A1-208ENST00000618395 RAB40AQ8WXH6 277 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 RADILQ96JH8 1075 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 BMP1P13497 986 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 INSRRP14616 1297 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 FOLR1P15328 257 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 OAZ1P54368 228 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 PPP4CP60510 307 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 CTRCQ99895 268 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 PRRC2BQ5JSZ5 2229 aaKnown RBP14.28□□□□□ -0.12
COL5A1-208ENST00000618395 WNT9AO14904 365 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 BAMBIQ13145 260 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 MEX3BQ6ZN04 569 aaKnown RBP14.28□□□□□ -0.12
COL5A1-208ENST00000618395 TMUB2Q71RG4 321 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 OR6K2Q8NGY2 324 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 UPRTQ96BW1 309 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 DOCK8Q8NF50 2099 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 NDUFV2P19404 249 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 CRHBPP24387 322 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 P2RX3P56373 397 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 GTDC1Q4AE62 458 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 ZNF691Q5VV52 312 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 LRFN4Q6PJG9 635 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 BPHLQ86WA6 291 aaPredicted RBP14.28□□□□□ -0.12
COL5A1-208ENST00000618395 CFAP52Q8N1V2 620 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 C1orf52Q8N6N3 182 aaKnown RBP14.28□□□□□ -0.12
COL5A1-208ENST00000618395 BLNKQ8WV28 456 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 REEP6Q96HR9 211 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 MAP6Q96JE9 813 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 OR8D2Q9GZM6 311 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 FBXO8Q9NRD0 319 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 SDHAF3Q9NRP4 125 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 HEBP2Q9Y5Z4 205 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 ITGAMP11215 1152 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 ZP3P21754 424 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 RPS13P62277 151 aaKnown RBP14.28□□□□□ -0.12
COL5A1-208ENST00000618395 NKX3-2P78367 333 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 IRF2BP1Q8IU81 584 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 IL17RCQ8NAC3 791 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 WDR20Q8TBZ3 569 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 ESAMQ96AP7 390 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 KCTD12Q96CX2 325 aaKnown RBP14.28□□□□□ -0.12
COL5A1-208ENST00000618395 BET1LQ9NYM9 111 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 ERVK-16P61578 105 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 CAMK2DQ13557 499 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 GPR155Q7Z3F1 870 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 RELL1Q8IUW5 271 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 C11orf84Q9BUA3 381 aaPredicted RBP14.28□□□□□ -0.12
COL5A1-208ENST00000618395 SLC39A9Q9NUM3 307 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 FUCA1P04066 466 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 FGF3P11487 239 aaPredicted RBP14.28□□□□□ -0.12
COL5A1-208ENST00000618395 GCAP28676 217 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 RACK1P63244 317 aaKnown RBP14.28□□□□□ -0.12
COL5A1-208ENST00000618395 SLBPQ14493 270 aaKnown RBP eCLIP14.28□□□□□ -0.12
COL5A1-208ENST00000618395 RBM39Q14498 530 aaKnown RBP14.28□□□□□ -0.12
COL5A1-208ENST00000618395 OR2T2Q6IF00 324 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 LIX1LQ8IVB5 337 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 ATG4CQ96DT6 458 aa14.28□□□□□ -0.12
COL5A1-208ENST00000618395 ZNF629Q9UEG4 869 aaPredicted RBP14.28□□□□□ -0.12
COL5A1-208ENST00000618395 BCKDHBP21953 392 aa14.27□□□□□ -0.12
COL5A1-208ENST00000618395 ZNF763Q0D2J5 394 aa14.27□□□□□ -0.12
COL5A1-208ENST00000618395 EEF1DP3Q658K8 133 aa14.27□□□□□ -0.12
COL5A1-208ENST00000618395 BTNL8Q6UX41 500 aa14.27□□□□□ -0.12
COL5A1-208ENST00000618395 MUL1Q969V5 352 aa14.27□□□□□ -0.12
COL5A1-208ENST00000618395 DGAT2Q96PD7 388 aa14.27□□□□□ -0.12
COL5A1-208ENST00000618395 ZNF587Q96SQ5 575 aaPredicted RBP14.27□□□□□ -0.12
COL5A1-208ENST00000618395 KIAA1522Q9P206 1035 aaPredicted RBP14.27□□□□□ -0.12
COL5A1-208ENST00000618395 CLDN5O00501 218 aa14.27□□□□□ -0.12
COL5A1-208ENST00000618395 KLF8O95600 359 aaPredicted RBP14.27□□□□□ -0.12
COL5A1-208ENST00000618395 P2RX1P51575 399 aa14.27□□□□□ -0.12
COL5A1-208ENST00000618395 ZNF280AP59817 542 aaPredicted RBP14.27□□□□□ -0.12
COL5A1-208ENST00000618395 TAF9BQ9HBM6 251 aa14.27□□□□□ -0.12
COL5A1-208ENST00000618395 DCTN6O00399 190 aa14.27□□□□□ -0.12
COL5A1-208ENST00000618395 CNR2P34972 360 aa14.27□□□□□ -0.12
COL5A1-208ENST00000618395 MOGAT2Q3SYC2 334 aa14.27□□□□□ -0.12
COL5A1-208ENST00000618395 SLC18B1Q6NT16 456 aa14.27□□□□□ -0.12
COL5A1-208ENST00000618395 GOLGA7Q7Z5G4 137 aa14.27□□□□□ -0.12
COL5A1-208ENST00000618395 OR6S1Q8NH40 331 aa14.27□□□□□ -0.12
COL5A1-208ENST00000618395 ACDQ96AP0 544 aa14.27□□□□□ -0.12
COL5A1-208ENST00000618395 SFXN2Q96NB2 322 aa14.27□□□□□ -0.12
COL5A1-208ENST00000618395 RBP7Q96R05 134 aa14.27□□□□□ -0.12
COL5A1-208ENST00000618395 PCED1AQ9H1Q7 454 aa14.27□□□□□ -0.12
COL5A1-208ENST00000618395 ASB6Q9NWX5 421 aa14.27□□□□□ -0.12
COL5A1-208ENST00000618395 SCO1O75880 301 aa14.27□□□□□ -0.13
COL5A1-208ENST00000618395 C1RP00736 705 aa14.27□□□□□ -0.13
COL5A1-208ENST00000618395 GRM2Q14416 872 aa14.27□□□□□ -0.13
COL5A1-208ENST00000618395 IL17AQ16552 155 aa14.27□□□□□ -0.13
COL5A1-208ENST00000618395 SMUG1Q53HV7 270 aa14.27□□□□□ -0.13
COL5A1-208ENST00000618395 FAM162BQ5T6X4 162 aa14.27□□□□□ -0.13
COL5A1-208ENST00000618395 ATPAF1Q5TC12 328 aaPredicted RBP14.27□□□□□ -0.13
COL5A1-208ENST00000618395 LYSMD2Q8IV50 215 aa14.27□□□□□ -0.13
COL5A1-208ENST00000618395 ADAMTS14Q8WXS8 1223 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms