RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 NUP50Q9UKX7 468 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 NPIPA5A0A0B4J1W7 369 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 NPIPA7E9PJI5 369 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 KCNK5O95279 499 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 LDOC1O95751 146 aaPredicted RBP13.04□□□□□ -0.32
CIITA-213ENST00000618327 B3GALT4O96024 378 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 NPIPA8P0DM63 369 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 TEAD1P28347 426 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 SCRN3Q0VDG4 424 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 CCNJQ5T5M9 372 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 TP53I13Q8NBR0 393 aaPredicted RBP13.04□□□□□ -0.32
CIITA-213ENST00000618327 MS4A6EQ96DS6 147 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 GLIPR2Q9H4G4 154 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 TMEM9Q9P0T7 183 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 ABCG2Q9UNQ0 655 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 A0A1W2PPW3 197 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 WRBO00258 174 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 HLCSP50747 726 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 VBP1P61758 197 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 PIGFQ07326 219 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 PUM1Q14671 1186 aaKnown RBP eCLIP13.04□□□□□ -0.32
CIITA-213ENST00000618327 CMPK2Q5EBM0 449 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 ADNP2Q6IQ32 1131 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 SLC48A1Q6P1K1 146 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 DLEU7Q6UYE1 221 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 ATCAYQ86WG3 371 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 GID4Q8IVV7 300 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 TOR1AIP2Q8NFQ8 470 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 OR51G2Q8NGK0 314 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 AMDHD1Q96NU7 426 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 OR4K3Q96R72 315 aa13.04□□□□□ -0.32
CIITA-213ENST00000618327 LIN28AQ9H9Z2 209 aaKnown RBP13.04□□□□□ -0.32
CIITA-213ENST00000618327 OTOL1A6NHN0 477 aaPredicted RBP13.03□□□□□ -0.32
CIITA-213ENST00000618327 TEX46H3BTG2 121 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 CDC40O60508 579 aaKnown RBP eCLIP13.03□□□□□ -0.32
CIITA-213ENST00000618327 RAB36O95755 333 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 CD2P06729 351 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 VASPP50552 380 aaPredicted RBP13.03□□□□□ -0.32
CIITA-213ENST00000618327 DEFA5Q01523 94 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 PMS2P3Q13401 168 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 MANEAQ5SRI9 462 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 ARL9Q6T311 187 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 PTRH1Q86Y79 214 aaKnown RBP13.03□□□□□ -0.32
CIITA-213ENST00000618327 CHST4Q8NCG5 386 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 SLC38A5Q8WUX1 472 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 TRIM36Q9NQ86 728 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 MAGED1Q9Y5V3 778 aaPredicted RBP13.03□□□□□ -0.32
CIITA-213ENST00000618327 YKT6O15498 198 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 SERPINA3P01011 423 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 APOC1P02654 83 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 OSMP13725 252 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 GPX2P18283 190 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 OTX2P32243 289 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 DNASE1L1P49184 302 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 ADAM8P78325 824 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 MAFAQ8NHW3 353 aaPredicted RBP13.03□□□□□ -0.32
CIITA-213ENST00000618327 C12orf43Q96C57 262 aaKnown RBP13.03□□□□□ -0.32
CIITA-213ENST00000618327 ZNF597Q96LX8 424 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 FGF21Q9NSA1 209 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 C11orf98E9PRG8 122 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 GAPDHSO14556 408 aaPredicted RBP13.03□□□□□ -0.32
CIITA-213ENST00000618327 CEBPGP53567 150 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 CD83Q01151 205 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 ELOAQ14241 798 aaKnown RBP13.03□□□□□ -0.32
CIITA-213ENST00000618327 GK3PQ14409 553 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 SLC22A16Q86VW1 577 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 SLITRK4Q8IW52 837 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 NEK7Q8TDX7 302 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 C16orf58Q96GQ5 468 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 KCTD7Q96MP8 289 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 GPER1Q99527 375 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 CMKLR1Q99788 373 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 NANSQ9NR45 359 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 WSB2Q9NYS7 404 aaPredicted RBP13.03□□□□□ -0.32
CIITA-213ENST00000618327 ERVK-18Q9QC07 812 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 ATG2BQ96BY7 2078 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 J3QLW9 94 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 YY2O15391 372 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 CHP2O43745 196 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 ZNF19P17023 458 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 MAGEA8P43361 318 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 PRR22Q8IZ63 422 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 ZNF676Q8N7Q3 588 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 ASB12Q8WXK4 309 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 DIO2Q92813 273 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 NEURL3Q96EH8 262 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 LRR1Q96L50 414 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 GABRG3Q99928 467 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 BTBD2Q9BX70 525 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 CENPMQ9NSP4 180 aa13.03□□□□□ -0.32
CIITA-213ENST00000618327 BRINP1O60477 761 aa13.02□□□□□ -0.32
CIITA-213ENST00000618327 SLC2A2P11168 524 aaPredicted RBP13.02□□□□□ -0.32
CIITA-213ENST00000618327 NR2C1P13056 603 aa13.02□□□□□ -0.32
CIITA-213ENST00000618327 COL9A1P20849 921 aa13.02□□□□□ -0.32
CIITA-213ENST00000618327 ENTPD1P49961 510 aa13.02□□□□□ -0.32
CIITA-213ENST00000618327 MNX1P50219 401 aaPredicted RBP13.02□□□□□ -0.32
CIITA-213ENST00000618327 OR1D5P58170 312 aa13.02□□□□□ -0.32
CIITA-213ENST00000618327 BTBD16Q32M84 506 aa13.02□□□□□ -0.32
CIITA-213ENST00000618327 FAM111BQ6SJ93 734 aa13.02□□□□□ -0.32
CIITA-213ENST00000618327 ZNF517Q6ZMY9 492 aaPredicted RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms