RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 ARRDC5A6NEK1 342 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 KIR2DS3K7RE56 304 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 HRKO00198 91 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 CASC3O15234 703 aaKnown RBP11.57□□□□□ -0.56
CIITA-212ENST00000618207 LRRTM2O43300 516 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 MTRF1O75570 445 aaKnown RBP11.57□□□□□ -0.56
CIITA-212ENST00000618207 THY1P04216 161 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 WNT1P04628 370 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 SERPINB10P48595 397 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 KIR2DS5Q14953 304 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 CEBPEQ15744 281 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 DEFB133Q30KQ1 61 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 SLC46A3Q7Z3Q1 461 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 ZAR1Q86SH2 424 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 OR2L13Q8N349 312 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 OR8D4Q8NGM9 314 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 MCFD2Q8NI22 146 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 PSD2Q9BQI7 771 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 CACYBPQ9HB71 228 aaKnown RBP11.57□□□□□ -0.56
CIITA-212ENST00000618207 EFCAB10A6NFE3 127 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 CLDN25C9JDP6 229 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 CYR61O00622 381 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 HYAL3O43820 417 aaPredicted RBP11.56□□□□□ -0.56
CIITA-212ENST00000618207 GALR3O60755 368 aaPredicted RBP11.56□□□□□ -0.56
CIITA-212ENST00000618207 MED26O95402 600 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 GNSP15586 552 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 ST3GAL3Q11203 375 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 BCL2A1Q16548 175 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 USP53Q70EK8 1073 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 BPHLQ86WA6 291 aaPredicted RBP11.56□□□□□ -0.56
CIITA-212ENST00000618207 CROCCP3Q8IVE0 287 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 CA13Q8N1Q1 262 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 ZNF655Q8N720 491 aaPredicted RBP11.56□□□□□ -0.56
CIITA-212ENST00000618207 OR8J1Q8NGP2 316 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 TEX47Q8TBZ9 253 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 FCGR1BQ92637 280 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 DIO2Q92813 273 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 TMEM203Q969S6 136 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 SAP130Q9H0E3 1048 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 WDR70Q9NW82 654 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 CHST10O43529 356 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 MPZL2O60487 215 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 GPR75O95800 540 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 RPLP0P05388 317 aaKnown RBP11.56□□□□□ -0.56
CIITA-212ENST00000618207 BMP4P12644 408 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 PCYT1AP49585 367 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 ZNF155Q12901 538 aaPredicted RBP11.56□□□□□ -0.56
CIITA-212ENST00000618207 TRAM2Q15035 370 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 ZNF628Q5EBL2 1059 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 DCST2Q5T1A1 773 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 NKAIN2Q5VXU1 208 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 C1orf94Q6P1W5 598 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 OR4N2Q8NGD1 307 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 SLC41A3Q96GZ6 507 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 ANKHQ9HCJ1 492 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 POLE4Q9NR33 117 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 SOHLH2Q9NX45 425 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 CALML5Q9NZT1 146 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 KCNE5Q9UJ90 142 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 ENTPD2Q9Y5L3 495 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 COL4A2P08572 1712 aa11.56□□□□□ -0.56
CIITA-212ENST00000618207 WDFY4Q6ZS81 3184 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 SMIM30A4D0T7 59 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 GNB5O14775 395 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 IFNA8P32881 189 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 PGDP52209 483 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 GFERP55789 205 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 LARS2Q15031 903 aaKnown RBP11.55□□□□□ -0.56
CIITA-212ENST00000618207 MRPL2Q5T653 305 aaKnown RBP11.55□□□□□ -0.56
CIITA-212ENST00000618207 C12orf73Q69YU5 71 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 SMARCD3Q6STE5 483 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 GDF7Q7Z4P5 450 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 GIMAP1Q8WWP7 306 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 TGM7Q96PF1 710 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 SLIRPQ9GZT3 109 aaKnown RBP11.55□□□□□ -0.56
CIITA-212ENST00000618207 TPK1Q9H3S4 243 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 ERGIC3Q9Y282 383 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 IGHV1OR15-9A0A0B4J2B8 117 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 SH3D21A4FU49 640 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 FAM183AA6NL82 134 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 ARHGAP33O14559 1287 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 UBXN7O94888 489 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 SLC2A10O95528 541 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 ALOX5P09917 674 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 MYF5P13349 255 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 SSTR4P31391 388 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 ARFIP1P53367 373 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 BTG2P78543 158 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 SYT14P1Q58G82 188 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 SNAP47Q5SQN1 464 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 OR2G6Q5TZ20 316 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 HSDL2Q6YN16 418 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 MCATQ8IVS2 390 aaKnown RBP11.55□□□□□ -0.56
CIITA-212ENST00000618207 OR52R1Q8NGF1 315 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 GRHL3Q8TE85 626 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 TRUB1Q8WWH5 349 aaKnown RBP11.55□□□□□ -0.56
CIITA-212ENST00000618207 SLC38A3Q99624 504 aa11.55□□□□□ -0.56
CIITA-212ENST00000618207 POLR2J2Q9GZM3 115 aaKnown RBP11.55□□□□□ -0.56
CIITA-212ENST00000618207 MTHFD2LQ9H903 347 aaPredicted RBP11.55□□□□□ -0.56
CIITA-212ENST00000618207 ATP13A2Q9NQ11 1180 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms