RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	MPPE1	Q53F39	396 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	GCNT6	Q5T4J0	391 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	C3orf33	Q6P1S2	294 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	GOLGA7	Q7Z5G4	137 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	SLC9B2	Q86UD5	537 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	SLC6A18	Q96N87	628 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	QRSL1	Q9H0R6	528 aa	Known RBP	10.87	□□□□□ -0.67
TP53-222	ENST00000617185	C11orf49	Q9H6J7	331 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	ZMYM5	Q9UJ78	669 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	ACSL6	Q9UKU0	697 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	PLEKHM1	Q9Y4G2	1056 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	COL4A4	P53420	1690 aa	Predicted RBP	10.87	□□□□□ -0.67
TP53-222	ENST00000617185	IGLV3-10	A0A075B6K4	115 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	ARPC5	O15511	151 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	LDB2	O43679	373 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	ACTR1B	P42025	376 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	RNF4	P78317	190 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	OAF	Q86UD1	273 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	SIAH3	Q8IW03	269 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	DMRTC2	Q8IXT2	367 aa	Predicted RBP	10.87	□□□□□ -0.67
TP53-222	ENST00000617185	RNF113B	Q8IZP6	322 aa	Known RBP	10.87	□□□□□ -0.67
TP53-222	ENST00000617185	PMM1	Q92871	262 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	HHIPL1	Q96JK4	782 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	ATP13A1	Q9HD20	1204 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	10.87	□□□□□ -0.67
TP53-222	ENST00000617185	TRPS1	Q9UHF7	1281 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	REV3L	O60673	3130 aa		10.87	□□□□□ -0.67
TP53-222	ENST00000617185	DOCK6	Q96HP0	2047 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	ZNF840P	A6NDX5	716 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	LRRTM2	O43300	516 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	FKTN	O75072	461 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	CDC123	O75794	336 aa	Predicted RBP	10.86	□□□□□ -0.67
TP53-222	ENST00000617185	B3GALT4	O96024	378 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	ACR	P10323	421 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	HOXD9	P28356	352 aa	Predicted RBP	10.86	□□□□□ -0.67
TP53-222	ENST00000617185	GK	P32189	559 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	CRYBA2	P53672	197 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	TAS2R60	P59551	318 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	RAB8A	P61006	207 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	SELENOW	P63302	87 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	DEFB103A	P81534	67 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	ZXDB	P98169	803 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	CHAF1B	Q13112	559 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	ILK	Q13418	452 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	ALKBH1	Q13686	389 aa	Known RBP	10.86	□□□□□ -0.67
TP53-222	ENST00000617185	GTF2H2	Q13888	395 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	C21orf62-AS1	Q17RA5	79 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	SLC22A10	Q63ZE4	541 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	GTF2H2C	Q6P1K8	395 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	ZC3H14	Q6PJT7	736 aa	Known RBP	10.86	□□□□□ -0.67
TP53-222	ENST00000617185	MARCH9	Q86YJ5	346 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	AQP11	Q8NBQ7	271 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	OR52I1	Q8NGK6	324 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	NELL1	Q92832	810 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	MS4A4E	Q96PG1	132 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	POLR1E	Q9GZS1	481 aa	Known RBP	10.86	□□□□□ -0.67
TP53-222	ENST00000617185	C20orf85	Q9H1P6	137 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	TEX10	Q9NXF1	929 aa	Predicted RBP	10.86	□□□□□ -0.67
TP53-222	ENST00000617185	NTM	Q9P121	344 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	TMEM218	A2RU14	115 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	SLC31A2	O15432	143 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	BNIP3L	O60238	219 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	GATB	O75879	557 aa	Known RBP	10.86	□□□□□ -0.67
TP53-222	ENST00000617185	IGLV3-27	P01718	113 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	HIST1H2AB	P04908	130 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	HEXA	P06865	529 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	FOLR2	P14207	255 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	NPR2	P20594	1047 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	CD79B	P40259	229 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	PDZK1IP1	Q13113	114 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	PCBP2	Q15366	365 aa	Known RBP eCLIP	10.86	□□□□□ -0.67	2e-6	■■■■■ 43.2
TP53-222	ENST00000617185	GUCA2B	Q16661	112 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	IDNK	Q5T6J7	187 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	TXNDC8	Q6A555	127 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	CASP12	Q6UXS9	341 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185		Q6ZTK2	550 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	MSANTD1	Q6ZTZ1	278 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	HIST3H2A	Q7L7L0	130 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	SLC44A3	Q8N4M1	653 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	OR8J1	Q8NGP2	316 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	GNPDA2	Q8TDQ7	276 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	HIST1H2AC	Q93077	130 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	CPNE4	Q96A23	557 aa	Predicted RBP	10.86	□□□□□ -0.67
TP53-222	ENST00000617185	TM6SF2	Q9BZW4	377 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	PIGM	Q9H3S5	423 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	IPPK	Q9H8X2	491 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	NDOR1	Q9UHB4	597 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	PLEKHA6	Q9Y2H5	1048 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	DRGX	A6NNA5	263 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185		K7ERQ8	282 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	NRG2	O14511	850 aa	Predicted RBP	10.86	□□□□□ -0.67
TP53-222	ENST00000617185	TXNL1	O43396	289 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	PRAMEF11	O60813	436 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	ULK1	O75385	1050 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	STC2	O76061	302 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	OR2A4	O95047	310 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	AKR7A3	O95154	331 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	C1QC	P02747	245 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	HLA-DPB1	P04440	258 aa		10.86	□□□□□ -0.67
TP53-222	ENST00000617185	HMGA1	P17096	107 aa	Known RBP	10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms