RNA–Protein interactions for RNA: ENST00000615842.1

U1.27-201, humanhuman

BASIC

Gene U1, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.27-201ENST00000615842 DEFB126Q9BYW3 111 aa8.19□□□□□ -1.1
U1.27-201ENST00000615842 KLHL4Q9C0H6 718 aa8.19□□□□□ -1.1
U1.27-201ENST00000615842 POLR2J2Q9GZM3 115 aaKnown RBP8.19□□□□□ -1.1
U1.27-201ENST00000615842 POLR2J3Q9H1A7 115 aaKnown RBP8.19□□□□□ -1.1
U1.27-201ENST00000615842 MMP25Q9NPA2 562 aa8.19□□□□□ -1.1
U1.27-201ENST00000615842 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.19□□□□□ -1.1
U1.27-201ENST00000615842 DLL3Q9NYJ7 618 aa8.19□□□□□ -1.1
U1.27-201ENST00000615842 CNOT11Q9UKZ1 510 aaKnown RBP8.19□□□□□ -1.1
U1.27-201ENST00000615842 MKLN1Q9UL63 735 aa8.19□□□□□ -1.1
U1.27-201ENST00000615842 ZNF443Q9Y2A4 671 aaPredicted RBP8.19□□□□□ -1.1
U1.27-201ENST00000615842 SH3GLB1Q9Y371 365 aa8.19□□□□□ -1.1
U1.27-201ENST00000615842 HS3ST3B1Q9Y662 390 aa8.19□□□□□ -1.1
U1.27-201ENST00000615842 GPR179Q6PRD1 2367 aa8.19□□□□□ -1.1
U1.27-201ENST00000615842 VCANP13611 3396 aa8.19□□□□□ -1.1
U1.27-201ENST00000615842 IGHV3-20A0A0C4DH32 117 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 TRBV11-1A0A0K0K1C0 115 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 PMS2P1A4D2B8 440 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 FAM149AA5PLN7 773 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 TMEM229AB2RXF0 380 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 H0YJX3 145 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 H3BNH8 94 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 TERTO14746 1132 aaKnown RBP8.18□□□□□ -1.1
U1.27-201ENST00000615842 NME6O75414 186 aaPredicted RBP8.18□□□□□ -1.1
U1.27-201ENST00000615842 REM1O75628 298 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 DNAJB5O75953 348 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 SEC24DO94855 1032 aaPredicted RBP8.18□□□□□ -1.1
U1.27-201ENST00000615842 PRSS23O95084 383 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 HPP00738 406 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 NGFRP08138 427 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 COX6A1P12074 109 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 CLK3P49761 638 aaKnown RBP8.18□□□□□ -1.1
U1.27-201ENST00000615842 NR0B1P51843 470 aaKnown RBP8.18□□□□□ -1.1
U1.27-201ENST00000615842 PLCXD2Q0VAA5 305 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 RSPO4Q2I0M5 234 aaPredicted RBP8.18□□□□□ -1.1
U1.27-201ENST00000615842 BTBD16Q32M84 506 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 CCNJQ5T5M9 372 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 OGFRL1Q5TC84 451 aaPredicted RBP8.18□□□□□ -1.1
U1.27-201ENST00000615842 KIRREL2Q6UWL6 708 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 AMIGO2Q86SJ2 522 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 HIPK1Q86Z02 1210 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 ZDHHC13Q8IUH4 622 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 GRAMD2AQ8IUY3 354 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 ZNF440Q8IYI8 595 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 DND1Q8IYX4 353 aaKnown RBP8.18□□□□□ -1.1
U1.27-201ENST00000615842 LILRA2Q8N149 483 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 IL22RA1Q8N6P7 574 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 ZNF321PQ8N8H1 164 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 GPR32P1Q8NGA4 272 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 OR11G2Q8NGC1 345 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 OR5K1Q8NHB7 308 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 SLC22A8Q8TCC7 542 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 ELP5Q8TE02 316 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 DIO2Q92813 273 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 NKD1Q969G9 470 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 ZNF300Q96RE9 604 aaPredicted RBP8.18□□□□□ -1.1
U1.27-201ENST00000615842 GAL3ST4Q96RP7 486 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 EPYCQ99645 322 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 PIP5K1AQ99755 562 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 NXF5Q9H1B4 397 aaKnown RBP8.18□□□□□ -1.1
U1.27-201ENST00000615842 REEP1Q9H902 201 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 UBQLN4Q9NRR5 601 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 NDUFAF4Q9P032 175 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 SLC35A3Q9Y2D2 325 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 DTX4Q9Y2E6 619 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 ENPP4Q9Y6X5 453 aa8.18□□□□□ -1.1
U1.27-201ENST00000615842 CACNA1HO95180 2353 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 OR6C70A6NIJ9 312 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 G3V2T6 193 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 hCG_2039718K7EN88 272 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 SCDO00767 359 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 SOCS6O14544 535 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 AP3D1O14617 1153 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 E2F6O75461 281 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 UGT2B17O75795 530 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 LIPCP11150 499 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 TBXA2RP21731 343 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 DNAJA1P31689 397 aaKnown RBP8.17□□□□□ -1.1
U1.27-201ENST00000615842 OTX2P32243 289 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 DCTP40126 519 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 ADH7P40394 386 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 RFX3P48380 749 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 HSPA13P48723 471 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 EEF1A1P68104 462 aaKnown RBP8.17□□□□□ -1.1
U1.27-201ENST00000615842 RPP38P78345 283 aaKnown RBP8.17□□□□□ -1.1
U1.27-201ENST00000615842 VLDLRP98155 873 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 NRF1Q16656 503 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 GRAMD1BQ3KR37 738 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 HMBOX1Q6NT76 420 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 JMJD6Q6NYC1 403 aaPredicted RBP8.17□□□□□ -1.1
U1.27-201ENST00000615842 ZBTB49Q6ZSB9 765 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 ZNF550Q7Z398 422 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 NUP54Q7Z3B4 507 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 PPP1R32Q7Z5V6 425 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 RANBP3LQ86VV4 465 aaPredicted RBP8.17□□□□□ -1.1
U1.27-201ENST00000615842 CARM1Q86X55 608 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 DTX1Q86Y01 620 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 VRK2Q86Y07 508 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 LINC00471Q8N535 108 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 SLC5A8Q8N695 610 aa8.17□□□□□ -1.1
U1.27-201ENST00000615842 ZSCAN1Q8NBB4 408 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms