RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 RBMS2Q15434 407 aaKnown RBP9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 SMAD2Q15796 467 aaKnown RBP9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 OCLNQ16625 522 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 RAB8BQ92930 207 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 SEPT5Q99719 369 aaPredicted RBP9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 ARHGAP9Q9BRR9 750 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 YIPF4Q9BSR8 244 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 MFFQ9GZY8 342 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 MYEF2Q9P2K5 600 aaKnown RBP9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 MYO7AQ13402 2215 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 TMEM200CA6NKL6 621 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 TMEM229AB2RXF0 380 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 SCAMP2O15127 329 aaKnown RBP9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 SELENOFO60613 162 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 LIMS3P0CW19 117 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 LIMS4P0CW20 117 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 OR12D1P0DN82 309 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 GABRA1P14867 456 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 ANXA7P20073 488 aaKnown RBP9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 GRK4P32298 578 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 ARFIP1P53367 373 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 CTSCP53634 463 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 LIM2P55344 173 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 RAB40BQ12829 278 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 AVPI1Q5T686 147 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 ATXN7L2Q5T6C5 722 aaPredicted RBP9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 AFMIDQ63HM1 303 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 SLC36A4Q6YBV0 504 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 MCATQ8IVS2 390 aaKnown RBP9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 OR8J2Q8NGG1 315 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 TNFAIP8L1Q8WVP5 186 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 KAT2AQ92830 837 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 FZD3Q9NPG1 666 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 CHST2Q9Y4C5 530 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 PRSS21Q9Y6M0 314 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 CKAP5Q14008 2032 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 TMEM129A0AVI4 362 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 SAP18O00422 153 aaKnown RBP9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 PRODHO43272 600 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 INHAP05111 366 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 SNRPBP14678 240 aaKnown RBP9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 PSMB1P20618 241 aaKnown RBP9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 UBE2MP61081 183 aaKnown RBP9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 BLOC1S1P78537 153 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 PITPNAQ00169 270 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 CEACAM19Q7Z692 300 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 ATAD1Q8NBU5 361 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 OR52N1Q8NH53 320 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 AUNIPQ9H7T9 357 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 TMEM248Q9NWD8 314 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 SEC14L3Q9UDX4 400 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 IL20RAQ9UHF4 553 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 GPN3Q9UHW5 284 aaPredicted RBP9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 PLSCR5A0PG75 271 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 IRGMA1A4Y4 181 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 ACAA1P09110 424 aaPredicted RBP9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 PAICSP22234 425 aaKnown RBP9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 GDNFP39905 211 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 SEMG2Q02383 582 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 DUSP4Q13115 394 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 NOGQ13253 232 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 SLC36A2Q495M3 483 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 FAAP20Q6NZ36 180 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 SFXN4Q6P4A7 337 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 CXXC5Q7LFL8 322 aaKnown RBP9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 TMCO2Q7Z6W1 182 aaPredicted RBP9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 SYT9Q86SS6 491 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 ADGRG2Q8IZP9 1017 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 SVBPQ8N300 66 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 FAM26EQ8N5C1 309 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 PFDN5Q99471 154 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 ZNF251Q9BRH9 671 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 SARGQ9BW04 601 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 EGLN3Q9H6Z9 239 aa9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 ZNF334Q9HCZ1 680 aaPredicted RBP9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 ING1Q9UK53 422 aaPredicted RBP9.75□□□□□ -0.85
TNFAIP3-208ENST00000615468 PRAMEF11O60813 436 aa9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 HTR3BO95264 441 aa9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 CRYBA1P05813 215 aa9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 RPL17P18621 184 aaKnown RBP9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 ELAVL4P26378 380 aaKnown RBP9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 IRS1P35568 1242 aa9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 SIM1P81133 766 aaPredicted RBP9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 RIPPLY1Q0D2K3 151 aa9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 TMEM201Q5SNT2 666 aa9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 ALKAL1Q6UXT8 129 aa9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 TECPR1Q7Z6L1 1165 aa9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 SERINC5Q86VE9 423 aa9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 THEM5Q8N1Q8 247 aa9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 TMEM86AQ8N2M4 240 aa9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 TEX26Q8N6G2 289 aa9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 PCSK9Q8NBP7 692 aaKnown RBP9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 OR51G2Q8NGK0 314 aa9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 OR6K2Q8NGY2 324 aa9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 ELP4Q96EB1 424 aa9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 ZC3H10Q96K80 434 aaKnown RBP9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 DMRTA2Q96SC8 542 aa9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 WDR77Q9BQA1 342 aaPredicted RBP9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 POLDIP3Q9BY77 421 aaKnown RBP9.74□□□□□ -0.85
TNFAIP3-208ENST00000615468 NOX3Q9HBY0 568 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms