RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 C3orf38Q5JPI3 329 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 C9orf50Q5SZB4 431 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 PRAMEF5Q5TYX0 476 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 PRAMEF9Q5VWM5 478 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 KHDRBS2Q5VWX1 349 aaKnown RBP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 PRAMEF6Q5VXH4 476 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 TBC1D3GQ6DHY5 549 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 FIGLAQ6QHK4 219 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 UNQ9370/PRO34162Q6UXP9 181 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 NHLRC1Q6VVB1 395 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 WDR88Q6ZMY6 472 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 TCF24Q7RTU0 167 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 PID1Q7Z2X4 250 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 IRF2BP2Q7Z5L9 587 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 PEG10Q86TG7 708 aaKnown RBP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 RBM45Q8IUH3 476 aaKnown RBP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 PLD3Q8IV08 490 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 WDFY1Q8IWB7 410 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 SKA3Q8IX90 412 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 RHOT1Q8IXI2 618 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 SIRT2Q8IXJ6 389 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 SHISA5Q8N114 240 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 ARHGEF39Q8N4T4 335 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 GDPD1Q8N9F7 314 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 OR56B1Q8NGI3 324 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 ZFP90Q8TF47 636 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 PIGBQ92521 554 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 ARRDC3Q96B67 414 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 DAZAP1Q96EP5 407 aaKnown RBP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 KLHDC7BQ96G42 594 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 MS4A14Q96JA4 679 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 HHIPL1Q96JK4 782 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 RPL10LQ96L21 214 aaKnown RBP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 SENP8Q96LD8 212 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 AMDHD1Q96NU7 426 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 CSF3RQ99062 836 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 ELF4Q99607 663 aaPredicted RBP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 CITED1Q99966 193 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 MESP1Q9BRJ9 268 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 PHF7Q9BWX1 381 aaPredicted RBP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 LGR4Q9BXB1 951 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 TM6SF2Q9BZW4 377 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 RAB1BQ9H0U4 201 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 SLITRK2Q9H156 845 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 P2RY12Q9H244 342 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 DCSTAMPQ9H295 470 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 NKX2-4Q9H2Z4 354 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 SLC28A3Q9HAS3 691 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 MYNNQ9NPC7 610 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 ABCB10Q9NRK6 738 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 GPR27Q9NS67 375 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 FAM207AQ9NSI2 230 aaPredicted RBP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 DAPP1Q9UN19 280 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 ICKQ9UPZ9 632 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 NIP7Q9Y221 180 aaKnown RBP eCLIP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 RHBDD3Q9Y3P4 386 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 SPATA31A6Q5VVP1 1343 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 ZMYM2Q9UBW7 1377 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 ZFYVE9O95405 1425 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 ABCA6Q8N139 1617 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 SHPRHQ149N8 1683 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 TEX13DA0A0J9YY54 714 aaPredicted RBP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 FAM237BA0A1B0GVD1 139 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 CCDC182A6NF36 153 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 FABP12A6NFH5 140 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 ANHXE9PGG2 379 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 M0R296 226 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 SLC28A1O00337 649 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 KPNA3O00505 521 aaPredicted RBP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 GYG2O15488 501 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 TAF5LO75529 589 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 PIAS1O75925 651 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 SLC16A8O95907 504 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 CBX7O95931 251 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 CYB5R3P00387 301 aaPredicted RBP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 ALPLP05186 524 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 C2P06681 752 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 SPP1P10451 314 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 CD8BP10966 210 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 PFKFB1P16118 471 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 EFNA1P20827 205 aaPredicted RBP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 S1PR1P21453 382 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 EPHA1P21709 976 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 DGKAP23743 735 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 MGAT1P26572 445 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 APEX1P27695 318 aaKnown RBP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 HLA-DMAP28067 261 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 GJB2P29033 226 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 CD6P30203 668 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 HOXC9P31274 260 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 CEACAM8P31997 349 aaPredicted RBP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 PTGER4P35408 488 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 QARSP47897 775 aaKnown RBP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 SESN2P58004 480 aaPredicted RBP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 CDC42P60953 191 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 MRPS22P82650 360 aaKnown RBP2.85□□□□□ -1.95
CBWD3-209ENST00000614377 CDKL1Q00532 357 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 SLC9A3R2Q15599 337 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 VAMP3Q15836 100 aa2.85□□□□□ -1.95
CBWD3-209ENST00000614377 COL28A1Q2UY09 1125 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms