RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 SCP2D1Q9UJQ7 156 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 SCML1Q9UN30 329 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 TBC1D3DA0A087WVF3 549 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 MEIKINA0A087WXM9 373 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 TBC1D3IA0A087WXS9 549 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 TBC1D3EA0A087X179 549 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 TBC1D3KA0A087X1G2 549 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 GLYATL1P3A0A0U1RQE8 302 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 TBC1D3FA6NER0 549 aaPredicted RBP20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 TBC1D3LB9A6J9 549 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 TBC1D3HP0C7X1 549 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 SMIM11AP58511 58 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 PUDPQ08623 228 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 SEC23BQ15437 767 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 NDUFA9Q16795 377 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 DCST1Q5T197 706 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 TBC1D3GQ6DHY5 549 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 TBC1D3CQ6IPX1 549 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 DPPA4Q7L190 304 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 C1orf210Q8IVY1 113 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 TBC1D3Q8IZP1 549 aaPredicted RBP20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 GPR26Q8NDV2 337 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 CDC26Q8NHZ8 85 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 KLK6Q92876 244 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 SLC35A5Q9BS91 424 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 SHARPINQ9H0F6 387 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 POLR2J3Q9H1A7 115 aaKnown RBP20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 RDH8Q9NYR8 311 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 EMC3Q9P0I2 261 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 USP36Q9P275 1121 aaKnown RBP20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 GULP1Q9UBP9 304 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 CBLCQ9ULV8 474 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 CACNG2Q9Y698 323 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 TRBV4-1A0A0J9YWV2 114 aa20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 A0A1W2PPL8 197 aa20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 H3BN98 237 aa20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 KPNA5O15131 536 aa20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 MPC2O95563 127 aa20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 HLA-DPB1P04440 258 aa20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 MPC1LP0DKB6 136 aa20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 ACP2P11117 423 aa20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 AVPR1BP47901 424 aa20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 CSTF1Q05048 431 aaKnown RBP20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 COX10Q12887 443 aa20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 CAMK2DQ13557 499 aa20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 SYT14P1Q58G82 188 aa20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 CD300LDQ6UXZ3 194 aa20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 OVCH2Q7RTZ1 564 aa20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 ANKRD53Q8N9V6 530 aa20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 ST8SIA4Q92187 359 aa20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 SENP5Q96HI0 755 aaPredicted RBP20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 ARHGAP9Q9BRR9 750 aa20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 IL26Q9NPH9 171 aa20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 ACSL5Q9ULC5 683 aa20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 YARS2Q9Y2Z4 477 aaKnown RBP20.56■□□□□ 0.88
POLR2J3-220ENST00000613744 A8MUA0 341 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 KRBOX1C9JBD0 128 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 PRAMEF4O60810 478 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 RECKO95980 971 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 MAT2AP31153 395 aaKnown RBP20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 ZNF81P51508 661 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 GAS1P54826 345 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 AP1S2P56377 157 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 ZXDCQ2QGD7 858 aaPredicted RBP20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 XKR6Q5GH73 641 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 PRAMEF9Q5VWM5 478 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 ANGPTL8Q6UXH0 198 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 LIPIQ6XZB0 460 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 Q6ZVL8 140 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 LRRC28Q86X40 367 aaPredicted RBP20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 MAML2Q8IZL2 1156 aaPredicted RBP20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 DEFB119Q8N690 84 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 ARIH2OSQ8N7S6 290 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 DTWD2Q8NBA8 298 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 ZBTB44Q8NCP5 570 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 ZNF582Q96NG8 517 aaPredicted RBP20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 IER2Q9BTL4 223 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 BTBD1Q9H0C5 482 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 ZNF275Q9NSD4 429 aaPredicted RBP20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 ASB6Q9NWX5 421 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 ATPIF1Q9UII2 106 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 CRLS1Q9UJA2 301 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 MGAT4DA6NG13 374 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 PLRG1O43660 514 aaKnown RBP20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 LALBAP00709 142 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 ANXA4P09525 319 aaPredicted RBP20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 AVPR2P30518 371 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 SPAM1P38567 509 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 RPL3P39023 403 aaKnown RBP20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 FEN1P39748 380 aaKnown RBP20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 RFX3P48380 749 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 SPINT3P49223 89 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 RAE1P78406 368 aaKnown RBP20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 ACSM1Q08AH1 577 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 DBPQ10586 325 aaPredicted RBP20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 ZNF273Q14593 569 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 TFAP2EQ6VUC0 442 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 FGD2Q7Z6J4 655 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 UXS1Q8NBZ7 420 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 APOBEC4Q8WW27 367 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms