RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 CAPN13Q6MZZ7 669 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 SEZ6L2Q6UXD5 910 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 GPR142Q7Z601 462 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 BOLLQ8N9W6 283 aaKnown RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 FIBINQ8TAL6 211 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF596Q8TC21 504 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 CLMPQ9H6B4 373 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 TGFB1P01137 390 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 HBE1P02100 147 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 WNT4P56705 351 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 TAS2R50P59544 299 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 KLF1Q13351 362 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 LRRC37A5PQ49AS3 106 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 UBE2NLQ5JXB2 153 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 CATSPERGQ6ZRH7 1159 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 TRILQ7L0X0 811 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 CARFQ8N187 725 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 GPR137Q96N19 417 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 FEVQ99581 238 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 CRLF2Q9HC73 371 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 MAP4K5Q9Y4K4 846 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 FRMPD3Q5JV73 1810 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 CCDC88CQ9P219 2028 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 ABHD14A-ACY1A0A1B0GW23 586 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 RFPL4AA6NLU0 287 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 PPP5D1E7EU14 171 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 RFPL4AL1F8VTS6 287 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 RNASEK-C17orf49H0YIS7 233 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 TMEM189-UBE2V1I3L0A0 370 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 PLRG1O43660 514 aaKnown RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 MANFP55145 182 aaKnown RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 IRF8Q02556 426 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 MAP2K5Q13163 448 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 SLC14A2Q15849 920 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 USP53Q70EK8 1073 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 SIGLECL1Q8N7X8 197 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 DCUN1D4Q92564 292 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 GTF2IRD1Q9UHL9 959 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 A0A1B0GUH1 482 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 TTC24A2A3L6 582 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 HRO43593 1189 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 MPPED2Q15777 294 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 OR4E2Q8NGC2 313 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 FZD4Q9ULV1 537 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 PLXNB2O15031 1838 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 SLC22A23A1A5C7 686 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 LACTBL1A8MY62 500 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 WASH3PC4AMC7 463 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 PSMD10O75832 226 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF44P15621 663 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 SOX9P48436 509 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 HTRA3P83110 453 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 RAB40BQ12829 278 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 FAM183BPQ6ZVS7 135 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 BAGE3Q86Y29 109 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 BAGE2Q86Y30 109 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 ACBD7Q8N6N7 88 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 OR8D4Q8NGM9 314 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 OR8S1Q8NH09 359 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 RGMAQ96B86 450 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 UMAD1C9J7I0 102 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 RCBTB2O95199 551 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 F2P00734 622 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 EGFP01133 1207 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 C6P13671 934 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 SNRPGP62308 76 aaKnown RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 KIAA1211LQ6NV74 962 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 RPL22L1Q6P5R6 122 aaKnown RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 APOOLQ6UXV4 268 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 MEPEQ9NQ76 525 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF214Q9UL59 606 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF536O15090 1300 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 PSME4Q14997 1843 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 UNGP13051 313 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 GCSHP23434 173 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 CNTN2Q02246 1040 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 CAMK2DQ13557 499 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 JAGN1Q8N5M9 183 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 PCNPQ8WW12 178 aaKnown RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 NECTIN4Q96NY8 510 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 ASAH2Q9NR71 780 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF831Q5JPB2 1677 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 CXCL11O14625 94 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 CRYABP02511 175 aaKnown RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 RNF224P0DH78 156 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 EPHA4P54764 986 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 PRR5P85299 388 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 TTLL4Q14679 1199 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 OR8G1Q15617 311 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 MAPK14Q16539 360 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF239Q16600 458 aaKnown RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 DBX2Q6ZNG2 339 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 ANGPTL5Q86XS5 388 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 FUNDC1Q8IVP5 155 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 B3GNT7Q8NFL0 401 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 RNF31Q96EP0 1072 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 KLHL15Q96M94 604 aa4.7□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF582Q96NG8 517 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF300Q96RE9 604 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-213ENST00000613099 COPS8Q99627 209 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms