RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 NME4O00746 187 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 GNRHRP30968 328 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 TIA1P31483 386 aaKnown RBP eCLIP8.33□□□□□ -1.08
TTC28-208ENST00000612946 RFX2P48378 723 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 LSSP48449 732 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 ITPRIPL2Q3MIP1 535 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 FNDC3BQ53EP0 1204 aaKnown RBP8.33□□□□□ -1.08
TTC28-208ENST00000612946 PLEKHS1Q5SXH7 462 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 NOXRED1Q6NXP6 359 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 CATSPERGQ6ZRH7 1159 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 OR4D10Q8NGI6 311 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 GLYATL2Q8WU03 294 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 ZBTB8AQ96BR9 441 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 BORCS8Q96FH0 119 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 TBX5Q99593 518 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 OR2AG1Q9H205 316 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 ZNF629Q9UEG4 869 aaPredicted RBP8.33□□□□□ -1.08
TTC28-208ENST00000612946 TIAM2Q8IVF5 1701 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 CHRM5P08912 532 aaPredicted RBP8.33□□□□□ -1.08
TTC28-208ENST00000612946 IL1RNP18510 177 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 TMEM62Q0P6H9 643 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 ACOT6Q3I5F7 207 aaPredicted RBP8.33□□□□□ -1.08
TTC28-208ENST00000612946 VARS2Q5ST30 1063 aaKnown RBP8.33□□□□□ -1.08
TTC28-208ENST00000612946 MCEMP1Q8IX19 187 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 DUSP19Q8WTR2 217 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 TMEM125Q96AQ2 219 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 SLC7A11Q9UPY5 501 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 PIP5K1CO60331 668 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 TSPAN3O60637 253 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 CDC123O75794 336 aaPredicted RBP8.33□□□□□ -1.08
TTC28-208ENST00000612946 ACP2P11117 423 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 IDSP22304 550 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 KCNC1P48547 511 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 SNRPGP62308 76 aaKnown RBP8.33□□□□□ -1.08
TTC28-208ENST00000612946 RBM39Q14498 530 aaKnown RBP8.33□□□□□ -1.08
TTC28-208ENST00000612946 MFSD13AQ14CX5 517 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 DECR1Q16698 335 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 C2orf76Q3KRA6 126 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 OR5M8Q8NGP6 311 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 METTL21AQ8WXB1 218 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 TRIB2Q92519 343 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 RBMXL1Q96E39 390 aaKnown RBP8.33□□□□□ -1.08
TTC28-208ENST00000612946 ASH2LQ9UBL3 628 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 POU3F3P20264 500 aaPredicted RBP8.33□□□□□ -1.08
TTC28-208ENST00000612946 WDR5P61964 334 aaKnown RBP8.33□□□□□ -1.08
TTC28-208ENST00000612946 AANATQ16613 207 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 PTRH1Q86Y79 214 aaKnown RBP8.33□□□□□ -1.08
TTC28-208ENST00000612946 GPC2Q8N158 579 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 YTHDF2Q9Y5A9 579 aaKnown RBP8.33□□□□□ -1.08
TTC28-208ENST00000612946 FAM166BA8MTA8 275 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 FAM155AB1AL88 458 aaPredicted RBP8.33□□□□□ -1.08
TTC28-208ENST00000612946 SOX14O95416 240 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 VTNP04004 478 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 THBS1P07996 1170 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 TBPP20226 339 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 C19orf57Q0VDD7 668 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 SEMA3BQ13214 749 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 IGSF11Q5DX21 431 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 PRSS42Q7Z5A4 293 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 BAGE3Q86Y29 109 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 BAGE2Q86Y30 109 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 NIFKQ9BYG3 293 aaKnown RBP8.33□□□□□ -1.08
TTC28-208ENST00000612946 A0A1B0GUH1 482 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 SSTR2P30874 369 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 SOX3P41225 446 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 TNFRSF17Q02223 184 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 GPR148Q8TDV2 347 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 EXOSC3Q9NQT5 275 aaKnown RBP8.33□□□□□ -1.08
TTC28-208ENST00000612946 C17orf112F2Z3M2 114 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 GPR39O43194 453 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 HPGDSO60760 199 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 AKT2P31751 481 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 FBXO15Q8NCQ5 510 aaPredicted RBP8.33□□□□□ -1.08
TTC28-208ENST00000612946 OR1J2Q8NGS2 313 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 SDHAF3Q9NRP4 125 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 BTNL2Q9UIR0 455 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 F5P12259 2224 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 H7BY64 318 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 YY2O15391 372 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 TPST2O60704 377 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 AQP8O94778 261 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 SMIM18P0DKX4 95 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 DPEP1P16444 411 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 RIDAP52758 137 aaKnown RBP8.33□□□□□ -1.08
TTC28-208ENST00000612946 RAG2P55895 527 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 CDK5Q00535 292 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 PPA1Q15181 289 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 ACOT7LQ6ZUV0 252 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 OR4K17Q8NGC6 315 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 OR51L1Q8NGJ5 315 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 OR5AK2Q8NH90 309 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 SLC2A6Q9UGQ3 507 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 RPP14O95059 124 aaKnown RBP8.33□□□□□ -1.08
TTC28-208ENST00000612946 JUNDP17535 347 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 NDUFA6P56556 154 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 SLC29A4Q7RTT9 530 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 HPSE2Q8WWQ2 592 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 AKIP1Q9NQ31 210 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 SMPD4Q9NXE4 827 aa8.33□□□□□ -1.08
TTC28-208ENST00000612946 UTS2RQ9UKP6 389 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms