RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 CXCL13O43927 109 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 GMFGO60234 142 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 BANF1O75531 89 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 OPN1LWP04000 364 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 S100BP04271 92 aaPredicted RBP9.1□□□□□ -0.95
SSX3-204ENST00000612497 ZNF23P17027 643 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 EVI2BP34910 448 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 FEN1P39748 380 aaKnown RBP9.1□□□□□ -0.95
SSX3-204ENST00000612497 EMDP50402 254 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 CORO7P57737 925 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 TAS2R39P59534 338 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 PHEXP78562 749 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 MRPS22P82650 360 aaKnown RBP9.1□□□□□ -0.95
SSX3-204ENST00000612497 CHRNB3Q05901 458 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 E2F2Q14209 437 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 ACAP2Q15057 778 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 GLYR1Q49A26 553 aaPredicted RBP9.1□□□□□ -0.95
SSX3-204ENST00000612497 TRMT12Q53H54 448 aaKnown RBP9.1□□□□□ -0.95
SSX3-204ENST00000612497 CDKL4Q5MAI5 379 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 GRHL2Q6ISB3 625 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 RINLQ6ZS11 566 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 Q6ZSR9 355 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 LRRC70Q7Z2Q7 622 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 NUFIP2Q7Z417 695 aaKnown RBP9.1□□□□□ -0.95
SSX3-204ENST00000612497 GALNT10Q86SR1 603 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 NUDT13Q86X67 352 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 WDR75Q8IWA0 830 aaKnown RBP9.1□□□□□ -0.95
SSX3-204ENST00000612497 MAIP1Q8WWC4 291 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 EXT2Q93063 718 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 C1GALT1C1Q96EU7 318 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 BTBD9Q96Q07 612 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 CD244Q9BZW8 370 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 NPAP1Q9NZP6 1156 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 ZNF639Q9UID6 485 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 FKBP7Q9Y680 259 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 PMF1-BGLAPU3KQ54 211 aa9.1□□□□□ -0.95
SSX3-204ENST00000612497 TRIM77I1YAP6 450 aa9.09□□□□□ -0.95
SSX3-204ENST00000612497 TNFSF11O14788 317 aa9.09□□□□□ -0.95
SSX3-204ENST00000612497 NDUFB5O43674 189 aa9.09□□□□□ -0.95
SSX3-204ENST00000612497 NME6O75414 186 aaPredicted RBP9.09□□□□□ -0.95
SSX3-204ENST00000612497 ERAL1O75616 437 aaKnown RBP9.09□□□□□ -0.95
SSX3-204ENST00000612497 LYZL6O75951 148 aa9.09□□□□□ -0.95
SSX3-204ENST00000612497 ATP1B1P05026 303 aa9.09□□□□□ -0.95
SSX3-204ENST00000612497 PCSK2P16519 638 aa9.09□□□□□ -0.95
SSX3-204ENST00000612497 CSNK2A2P19784 350 aaPredicted RBP9.09□□□□□ -0.95
SSX3-204ENST00000612497 PNLIPRP2P54317 469 aa9.09□□□□□ -0.95
SSX3-204ENST00000612497 MRPS35P82673 323 aaKnown RBP9.09□□□□□ -0.95
SSX3-204ENST00000612497 LGALS3BPQ08380 585 aa9.09□□□□□ -0.95
SSX3-204ENST00000612497 CUL3Q13618 768 aa9.09□□□□□ -0.95
SSX3-204ENST00000612497 AWAT1Q58HT5 328 aa9.09□□□□□ -0.95
SSX3-204ENST00000612497 TREML4Q6UXN2 200 aa9.09□□□□□ -0.95
SSX3-204ENST00000612497 PEG10Q86TG7 708 aaKnown RBP9.09□□□□□ -0.95
SSX3-204ENST00000612497 NAT8LQ8N9F0 302 aa9.09□□□□□ -0.95
SSX3-204ENST00000612497 UHMK1Q8TAS1 419 aaKnown RBP9.09□□□□□ -0.95
SSX3-204ENST00000612497 ZNF418Q8TF45 676 aaPredicted RBP9.09□□□□□ -0.95
SSX3-204ENST00000612497 DUSP19Q8WTR2 217 aa9.09□□□□□ -0.95
SSX3-204ENST00000612497 RNF138Q8WVD3 245 aa9.09□□□□□ -0.95
SSX3-204ENST00000612497 REXO5Q96IC2 774 aaKnown RBP9.09□□□□□ -0.95
SSX3-204ENST00000612497 TRMOQ9BU70 441 aa9.09□□□□□ -0.95
SSX3-204ENST00000612497 DERL2Q9GZP9 239 aa9.09□□□□□ -0.95
SSX3-204ENST00000612497 MGAT4BQ9UQ53 548 aa9.09□□□□□ -0.95
SSX3-204ENST00000612497 PCDHGB1Q9Y5G3 927 aa9.09□□□□□ -0.95
SSX3-204ENST00000612497 PCDHGA11Q9Y5H2 935 aa9.09□□□□□ -0.95
SSX3-204ENST00000612497 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.09□□□□□ -0.95
SSX3-204ENST00000612497 LOC390937A0A1W2PQ73 354 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 LRP5LA4QPB2 252 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 SMAD9O15198 467 aaKnown RBP9.08□□□□□ -0.96
SSX3-204ENST00000612497 PABPC4LP0CB38 370 aaKnown RBP9.08□□□□□ -0.96
SSX3-204ENST00000612497 DHRS4L1P0CG22 281 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 CT45A8P0DMV1 189 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 CT45A9P0DMV2 189 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 SLC12A2P55011 1212 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 GPX6P59796 221 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 SPOCK1Q08629 439 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 OR4D1Q15615 310 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 LTB4RQ15722 352 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 CT45A2Q5DJT8 189 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 HBMQ6B0K9 141 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 TRMT10BQ6PF06 316 aaKnown RBP9.08□□□□□ -0.96
SSX3-204ENST00000612497 TMEM108Q6UXF1 575 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 B3GLCTQ6Y288 498 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 ZC3HC1Q86WB0 502 aaKnown RBP9.08□□□□□ -0.96
SSX3-204ENST00000612497 SLC44A2Q8IWA5 706 aaPredicted RBP9.08□□□□□ -0.96
SSX3-204ENST00000612497 TUSC5Q8IXB3 177 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 LRRC17Q8N6Y2 441 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 PDPRQ8NCN5 879 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 OR2V1Q8NHB1 315 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 ABHD3Q8WU67 409 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 CFAP36Q96G28 342 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 ADGRG7Q96K78 797 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 NAT9Q9BTE0 207 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 RBM4Q9BWF3 364 aaKnown RBP9.08□□□□□ -0.96
SSX3-204ENST00000612497 RTN4RQ9BZR6 473 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 BPESC1Q9GZL8 116 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 ANKRA2Q9H9E1 313 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 OPTCQ9UBM4 332 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 VDAC3Q9Y277 283 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 OR10H1Q9Y4A9 318 aa9.08□□□□□ -0.96
SSX3-204ENST00000612497 ZNF814B7Z6K7 855 aa9.07□□□□□ -0.96
SSX3-204ENST00000612497 ADAMDEC1O15204 470 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms