RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	RHPN2P1	A8MT19	583 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	CENPX	A8MT69	81 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	ARHGAP33	O14559	1287 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	TNFSF14	O43557	240 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	SOX14	O95416	240 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	IGFBP1	P08833	259 aa	Predicted RBP	12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	ADRA2A	P08913	450 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	TNFSF8	P32971	234 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	TMEM201	Q5SNT2	666 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	SPATC1	Q76KD6	591 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	COMTD1	Q86VU5	262 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	ASCC1	Q8N9N2	400 aa	Known RBP	12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	SLC7A13	Q8TCU3	470 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	MOAP1	Q96BY2	351 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	NDEL1	Q9GZM8	345 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	UCK1	Q9HA47	277 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	TAS2R16	Q9NYV7	291 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	SEC14L4	Q9UDX3	406 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	FBXW2	Q9UKT8	454 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	ENTPD4	Q9Y227	616 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	SLC9A8	Q9Y2E8	581 aa		12.98	□□□□□ -0.33
COPS7B-223	ENST00000611614	THADA	Q6YHU6	1953 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	CEP192	Q8TEP8	1941 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	URAD	A6NGE7	173 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	HMX3	A6NHT5	357 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614		H3BN98	237 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614		M0R3H8	397 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	AIFM1	O95831	613 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	SCG5	P05408	212 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	CHRM4	P08173	479 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	TDGF1	P13385	188 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	TARDBP	Q13148	414 aa	Known RBP eCLIP	12.97	□□□□□ -0.33	3e-6	■■■■□ 20.1
COPS7B-223	ENST00000611614	PIN1	Q13526	163 aa	Predicted RBP	12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	MED22	Q15528	200 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	C14orf28	Q4W4Y0	310 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	CASP12	Q6UXS9	341 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	ASPG	Q86U10	573 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	CCDC116	Q8IYX3	515 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	LINC00471	Q8N535	108 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	ZNF655	Q8N720	491 aa	Predicted RBP	12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	OR56A1	Q8NGH5	318 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	FLVCR1-AS1	Q8TAF5	88 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	SUN3	Q8TAQ9	357 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	PIGK	Q92643	395 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	CNRIP1	Q96F85	164 aa	Predicted RBP	12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	OR5M11	Q96RB7	305 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	ELF4	Q99607	663 aa	Predicted RBP	12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	FNDC11	Q9BVV2	318 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	DDX28	Q9NUL7	540 aa	Known RBP	12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	FBXO4	Q9UKT5	387 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	CES1P1	Q9UKY3	287 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	CSNK1G3	Q9Y6M4	447 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614		A0A0G2JPF8	293 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	LILRA5	A6NI73	299 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	HNRNPCL2	B2RXH8	293 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	HNRNPCL3	B7ZW38	293 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	CTDSP2	O14595	271 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	NME6	O75414	186 aa	Predicted RBP	12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	LGI1	O95970	557 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	HMGN2	P05204	90 aa	Known RBP	12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	HNRNPCL4	P0DMR1	293 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	CSNK2A2	P19784	350 aa	Predicted RBP	12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	CSTF2	P33240	577 aa	Known RBP eCLIP	12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	TSFM	P43897	325 aa	Known RBP	12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	RORC	P51449	518 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	MRPS15	P82914	257 aa	Known RBP	12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	ALDH6A1	Q02252	535 aa	Known RBP	12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	CDK10	Q15131	360 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	ZNF750	Q32MQ0	723 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	PLK5	Q496M5	336 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	ARMC4	Q5T2S8	1044 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	RNLS	Q5VYX0	342 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	SLC48A1	Q6P1K1	146 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	PODNL1	Q6PEZ8	512 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	TMPRSS11A	Q6ZMR5	421 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	OLIG3	Q7RTU3	272 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	DTWD2	Q8NBA8	298 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	WDR36	Q8NI36	951 aa	Known RBP	12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	RSC1A1	Q92681	617 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	OTUB1	Q96FW1	271 aa	Predicted RBP	12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	ZFYVE21	Q9BQ24	234 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	KCNS3	Q9BQ31	491 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	YIPF4	Q9BSR8	244 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	ASPN	Q9BXN1	380 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	ROGDI	Q9GZN7	287 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	UCKL1	Q9NWZ5	548 aa		12.97	□□□□□ -0.33
COPS7B-223	ENST00000611614	TECTA	O75443	2155 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	ZDBF2	Q9HCK1	2354 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	GPX5	O75715	221 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	TP53	P04637	393 aa	Predicted RBP	12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	PROS1	P07225	676 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	FH	P07954	510 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	ALPPL2	P10696	532 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	CERS1	P27544	350 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	PTGER1	P34995	402 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	FEN1	P39748	380 aa	Known RBP	12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	DUSP2	Q05923	314 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	FUT5	Q11128	374 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	COX10	Q12887	443 aa		12.96	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms