RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 NID1P14543 1247 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 CDH2P19022 906 aaPredicted RBP19.99■□□□□ 0.79
USP6NL-204ENST00000606752 E2F1Q01094 437 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 BLMHQ13867 455 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 NPTX1Q15818 432 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 FLYWCH1Q4VC44 716 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 GALNT5Q7Z7M9 940 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 ZAR1Q86SH2 424 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 SLC5A8Q8N695 610 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 PRRC1Q96M27 445 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 CMKLR1Q99788 373 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 G6PC3Q9BUM1 346 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 FNDC11Q9BVV2 318 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 KRT84Q9NSB2 600 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 SEMA4GQ9NTN9 838 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 SCOCQ9UIL1 159 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 TMCC3Q9ULS5 477 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 CBLCQ9ULV8 474 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 OR10H1Q9Y4A9 318 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 ARRDC5A6NEK1 342 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 CLDN24A6NM45 220 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 PEX12O00623 359 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 IGKV1D-16P01601 117 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 HEXBP07686 556 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 AGXTP21549 392 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 PPICP45877 212 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 RFX3P48380 749 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 MYBPC1Q00872 1141 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 IL1RL1Q01638 556 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 ILKQ13418 452 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 NR4A3Q92570 626 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 CDC6Q99741 560 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 SLC26A1Q9H2B4 701 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 PNPLA3Q9NST1 481 aa19.99■□□□□ 0.79
USP6NL-204ENST00000606752 WDR87Q6ZQQ6 2873 aa19.98■□□□□ 0.79
USP6NL-204ENST00000606752 NUP210LQ5VU65 1888 aa19.98■□□□□ 0.79
USP6NL-204ENST00000606752 NPIPA5A0A0B4J1W7 369 aa19.98■□□□□ 0.79
USP6NL-204ENST00000606752 A0A1W2PRQ8 180 aa19.98■□□□□ 0.79
USP6NL-204ENST00000606752 IDSB3KWA1 339 aa19.98■□□□□ 0.79
USP6NL-204ENST00000606752 B4E171 279 aa19.98■□□□□ 0.79
USP6NL-204ENST00000606752 NPIPA7E9PJI5 369 aa19.98■□□□□ 0.79
USP6NL-204ENST00000606752 SLC16A6O15403 523 aa19.98■□□□□ 0.79
USP6NL-204ENST00000606752 NPIPA8P0DM63 369 aa19.98■□□□□ 0.79
USP6NL-204ENST00000606752 TSPAN7P41732 249 aa19.98■□□□□ 0.79
USP6NL-204ENST00000606752 RGS8P57771 180 aaPredicted RBP19.98■□□□□ 0.79
USP6NL-204ENST00000606752 DGCR6Q14129 220 aa19.98■□□□□ 0.79
USP6NL-204ENST00000606752 DCST1Q5T197 706 aa19.98■□□□□ 0.79
USP6NL-204ENST00000606752 TMEM154Q6P9G4 183 aa19.98■□□□□ 0.79
USP6NL-204ENST00000606752 LANCL3Q6ZV70 420 aa19.98■□□□□ 0.79
USP6NL-204ENST00000606752 MORN4Q8NDC4 146 aa19.98■□□□□ 0.79
USP6NL-204ENST00000606752 MUS81Q96NY9 551 aa19.98■□□□□ 0.79
USP6NL-204ENST00000606752 ARMC7Q9H6L4 198 aa19.98■□□□□ 0.79
USP6NL-204ENST00000606752 SLC39A1Q9NY26 324 aa19.98■□□□□ 0.79
USP6NL-204ENST00000606752 TRBV4-1A0A0J9YWV2 114 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 LOC100130705A0A1B0GUX0 176 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 FRS3O43559 492 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 TPST2O60704 377 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 TNFAIP8O95379 198 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 ITGAMP11215 1152 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 ELAVL4P26378 380 aaKnown RBP19.97■□□□□ 0.79
USP6NL-204ENST00000606752 POLR2IP36954 125 aaKnown RBP19.97■□□□□ 0.79
USP6NL-204ENST00000606752 FOXL2P58012 376 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 FOXD4Q12950 439 aaPredicted RBP19.97■□□□□ 0.79
USP6NL-204ENST00000606752 NNATQ16517 81 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 FGD3Q5JSP0 725 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 RNF220Q5VTB9 566 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 FAAH2Q6GMR7 532 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 LCN10Q6JVE6 187 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 OFCC1Q8IZS5 231 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 BCORP1Q8N888 145 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 ZSCAN1Q8NBB4 408 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 LRFN5Q96NI6 719 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 NUDT9Q9BW91 350 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 UGT2B11O75310 529 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 OXSR1O95747 527 aaPredicted RBP19.97■□□□□ 0.79
USP6NL-204ENST00000606752 KLK3P07288 261 aaPredicted RBP19.97■□□□□ 0.79
USP6NL-204ENST00000606752 CCNYL3P0C7X3 344 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 ZNF28P17035 718 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 DRD5P21918 477 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 EMP2P54851 167 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 CCDC157Q569K6 752 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 TSPYL5Q86VY4 417 aaPredicted RBP19.97■□□□□ 0.79
USP6NL-204ENST00000606752 OR9Q2Q8NGE9 314 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 OR1N1Q8NGS0 311 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 METTL21AQ8WXB1 218 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 FUZQ9BT04 418 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 RIBC2Q9H4K1 309 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 ZNF556Q9HAH1 456 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 COPS7AQ9UBW8 275 aa19.97■□□□□ 0.79
USP6NL-204ENST00000606752 CDHR4A6H8M9 788 aa19.96■□□□□ 0.79
USP6NL-204ENST00000606752 C4orf47A7E2U8 309 aa19.96■□□□□ 0.79
USP6NL-204ENST00000606752 FAAHO00519 579 aa19.96■□□□□ 0.79
USP6NL-204ENST00000606752 AP3D1O14617 1153 aa19.96■□□□□ 0.79
USP6NL-204ENST00000606752 ALOX12BO75342 701 aa19.96■□□□□ 0.79
USP6NL-204ENST00000606752 IFNA8P32881 189 aa19.96■□□□□ 0.79
USP6NL-204ENST00000606752 DCAF7P61962 342 aa19.96■□□□□ 0.79
USP6NL-204ENST00000606752 CSRP2Q16527 193 aa19.96■□□□□ 0.79
USP6NL-204ENST00000606752 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.96■□□□□ 0.79
USP6NL-204ENST00000606752 MRPL2Q5T653 305 aaKnown RBP19.96■□□□□ 0.79
USP6NL-204ENST00000606752 ANKRD37Q7Z713 158 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms