RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 LOC100289279A0A1B0GTE1 492 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 SYCE1LA8MT33 242 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 TCF21O43680 179 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 KIAA0513O60268 411 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 RAMP1O60894 148 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 GCM2O75603 506 aaPredicted RBP13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 PIAS1O75925 651 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 USF1P22415 310 aaPredicted RBP13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 CFPP27918 469 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 AGTR1P30556 359 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 ALDH9A1P49189 494 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 IRX1P78414 480 aaPredicted RBP13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 IRF9Q00978 393 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 PDIA2Q13087 525 aaKnown RBP13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 TMEM201Q5SNT2 666 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 SFRP5Q5T4F7 317 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 TTC19Q6DKK2 380 aaPredicted RBP13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 TBC1D1Q86TI0 1168 aaPredicted RBP13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 ISCA2Q86U28 154 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 WDR75Q8IWA0 830 aaKnown RBP13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 CEP112Q8N8E3 955 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 TRPC4APQ8TEL6 797 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 DUSP19Q8WTR2 217 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 HTRA1Q92743 480 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 PROX1Q92786 737 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 KISS1RQ969F8 398 aaPredicted RBP13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 ATP6V1E2Q96A05 226 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 REXO5Q96IC2 774 aaKnown RBP13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 ATOH8Q96SQ7 321 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 USB1Q9BQ65 265 aaKnown RBP13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 POTEKPQ9BYX7 375 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 IPPKQ9H8X2 491 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 SAYSD1Q9NPB0 183 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 ABCG2Q9UNQ0 655 aa13.7□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 DPRXA6NFQ7 191 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 GOLGA6L6A8MZA4 724 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 KCNAB3O43448 404 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 NDUFB5O43674 189 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 CXCL13O43927 109 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 GMFGO60234 142 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 CLDN9O95484 217 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 GFAPP14136 432 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 DUSP2Q05923 314 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 GTF2H2Q13888 395 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 SH2D4BQ5SQS7 431 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 PDSS1Q5T2R2 415 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 MFSD12Q6NUT3 480 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 GTF2H2CQ6P1K8 395 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 NPSR1Q6W5P4 371 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 MEX3DQ86XN8 651 aaKnown RBP13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 RFLNBQ8N5W9 214 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 BANPQ8N9N5 519 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 OR4N2Q8NGD1 307 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 ERP27Q96DN0 273 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 VSTM2LQ96N03 204 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 GPR22Q99680 433 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 FAIM2Q9BWQ8 316 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 ANKRA2Q9H9E1 313 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 CBLN4Q9NTU7 201 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 SENP1Q9P0U3 644 aa13.69□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 SHISA8B8ZZ34 492 aa13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 NME6O75414 186 aaPredicted RBP13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 CSF3P09919 207 aa13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 PABPC4LP0CB38 370 aaKnown RBP13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 ZKSCAN8Q15776 578 aaPredicted RBP13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 STK11Q15831 433 aa13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 PFKFB4Q16877 469 aa13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 ZNF628Q5EBL2 1059 aa13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 ZNF662Q6ZS27 426 aa13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 GOLGA7Q7Z5G4 137 aa13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 GALNT10Q86SR1 603 aa13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 CCDC116Q8IYX3 515 aa13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 GABRG1Q8N1C3 465 aa13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 L3MBTL4Q8NA19 623 aa13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 ZNF675Q8TD23 568 aa13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 KAT2AQ92830 837 aa13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 CNRIP1Q96F85 164 aaPredicted RBP13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 RBBP8Q99708 897 aa13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 CPNE1Q99829 537 aa13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 ADAM19Q9H013 955 aa13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 TAS2R9Q9NYW1 312 aa13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 POU2F3Q9UKI9 436 aa13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 UTS2RQ9UKP6 389 aa13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 VDAC3Q9Y277 283 aa13.68□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 SLC35F4A4IF30 521 aa13.67□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 SHISA9B4DS77 424 aa13.67□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 ABCD4O14678 606 aa13.67□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 TNFSF11O14788 317 aa13.67□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 FADS1O60427 444 aa13.67□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 SIX3O95343 332 aaPredicted RBP13.67□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 ESRRBO95718 433 aa13.67□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 ADAP00813 363 aa13.67□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 LTA4HP09960 611 aaKnown RBP13.67□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 ME2P23368 584 aa13.67□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 TTKP33981 857 aa13.67□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 IFT88Q13099 833 aa13.67□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 ITGADQ13349 1161 aa13.67□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 FASTKD3Q14CZ7 662 aaKnown RBP13.67□□□□□ -0.22
NEDD8-MDP1-204ENST00000605847 PPA1Q15181 289 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms