RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 IGKV1D-16P01601 117 aa20.86■□□□□ 0.93
IRF3-228ENST00000601291 ITGA2P17301 1181 aa20.86■□□□□ 0.93
IRF3-228ENST00000601291 RPS4Y1P22090 263 aaKnown RBP20.86■□□□□ 0.93
IRF3-228ENST00000601291 NRG3P56975 720 aa20.86■□□□□ 0.93
IRF3-228ENST00000601291 RTP5Q14D33 572 aa20.86■□□□□ 0.93
IRF3-228ENST00000601291 TRIP10Q15642 601 aa20.86■□□□□ 0.93
IRF3-228ENST00000601291 LIN52Q52LA3 116 aa20.86■□□□□ 0.93
IRF3-228ENST00000601291 DHRS4L2Q6PKH6 230 aa20.86■□□□□ 0.93
IRF3-228ENST00000601291 TMEM102Q8N9M5 508 aaPredicted RBP20.86■□□□□ 0.93
IRF3-228ENST00000601291 M1APQ8TC57 530 aa20.86■□□□□ 0.93
IRF3-228ENST00000601291 IMMP1LQ96LU5 166 aa20.86■□□□□ 0.93
IRF3-228ENST00000601291 BDH2Q9BUT1 245 aa20.86■□□□□ 0.93
IRF3-228ENST00000601291 KLHL28Q9NXS3 571 aa20.86■□□□□ 0.93
IRF3-228ENST00000601291 ZNF443Q9Y2A4 671 aaPredicted RBP20.86■□□□□ 0.93
IRF3-228ENST00000601291 SLC9A8Q9Y2E8 581 aa20.86■□□□□ 0.93
IRF3-228ENST00000601291 PCDHGA10Q9Y5H3 936 aa20.86■□□□□ 0.93
IRF3-228ENST00000601291 hCG_2039718K7EN88 272 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 SYT5O00445 386 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 CLOCKO15516 846 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 PRKNO60260 465 aaPredicted RBP20.85■□□□□ 0.93
IRF3-228ENST00000601291 IL33O95760 270 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 IFNW1P05000 195 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 LIPCP11150 499 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 F8A1P23610 371 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 VLDLRP98155 873 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 PLCXD2Q0VAA5 305 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 EIPR1Q53HC9 387 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 PIWIL3Q7Z3Z3 882 aaKnown RBP20.85■□□□□ 0.93
IRF3-228ENST00000601291 AMIGO2Q86SJ2 522 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 VRK2Q86Y07 508 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 SLC34A3Q8N130 599 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 ELP5Q8TE02 316 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 TMBIM1Q969X1 311 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 ZG16BQ96DA0 208 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 NXPE2Q96DL1 559 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 CENPNQ96H22 339 aaPredicted RBP20.85■□□□□ 0.93
IRF3-228ENST00000601291 C7orf34Q96L11 122 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 DEFB126Q9BYW3 111 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 SEMA6AQ9H2E6 1030 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 ARMC7Q9H6L4 198 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 GPN2Q9H9Y4 310 aaPredicted RBP20.85■□□□□ 0.93
IRF3-228ENST00000601291 MMP25Q9NPA2 562 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 DNAJB9Q9UBS3 223 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 CDC14CA4D256 554 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 GNGT2O14610 69 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 UGT2B17O75795 530 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 TNFRSF1BP20333 461 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 IL12BP29460 328 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 LCN1P31025 176 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 OR1E2P47887 323 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 PTDSS1P48651 473 aaKnown RBP20.85■□□□□ 0.93
IRF3-228ENST00000601291 CAMK2BQ13554 666 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 HMBOX1Q6NT76 420 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 ZAR1Q86SH2 424 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 TAGAPQ8N103 731 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 DIO2Q92813 273 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 EFHD2Q96C19 240 aaPredicted RBP20.85■□□□□ 0.93
IRF3-228ENST00000601291 LMF1Q96S06 567 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 HOXD1Q9GZZ0 328 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 ZNF160Q9HCG1 818 aa20.85■□□□□ 0.93
IRF3-228ENST00000601291 NPIPA5A0A0B4J1W7 369 aa20.84■□□□□ 0.93
IRF3-228ENST00000601291 NPIPA7E9PJI5 369 aa20.84■□□□□ 0.93
IRF3-228ENST00000601291 PEX12O00623 359 aa20.84■□□□□ 0.93
IRF3-228ENST00000601291 CASQ2O14958 399 aaPredicted RBP20.84■□□□□ 0.93
IRF3-228ENST00000601291 HPP00738 406 aa20.84■□□□□ 0.93
IRF3-228ENST00000601291 NPIPA8P0DM63 369 aa20.84■□□□□ 0.93
IRF3-228ENST00000601291 ICAM2P13598 275 aa20.84■□□□□ 0.93
IRF3-228ENST00000601291 NID1P14543 1247 aa20.84■□□□□ 0.93
IRF3-228ENST00000601291 DCTP40126 519 aa20.84■□□□□ 0.93
IRF3-228ENST00000601291 CARM1Q86X55 608 aa20.84■□□□□ 0.93
IRF3-228ENST00000601291 OIT3Q8WWZ8 545 aa20.84■□□□□ 0.93
IRF3-228ENST00000601291 ZNF347Q96SE7 839 aa20.84■□□□□ 0.93
IRF3-228ENST00000601291 VCX3BQ9H321 246 aa20.84■□□□□ 0.93
IRF3-228ENST00000601291 ABCG2Q9UNQ0 655 aa20.84■□□□□ 0.93
IRF3-228ENST00000601291 REM1O75628 298 aa20.83■□□□□ 0.92
IRF3-228ENST00000601291 LGI1O95970 557 aa20.83■□□□□ 0.92
IRF3-228ENST00000601291 GCKP35557 465 aa20.83■□□□□ 0.92
IRF3-228ENST00000601291 ATP12AP54707 1039 aa20.83■□□□□ 0.92
IRF3-228ENST00000601291 IL10RAQ13651 578 aa20.83■□□□□ 0.92
IRF3-228ENST00000601291 ZNF141Q15928 474 aa20.83■□□□□ 0.92
IRF3-228ENST00000601291 RNF220Q5VTB9 566 aa20.83■□□□□ 0.92
IRF3-228ENST00000601291 ZNF836Q6ZNA1 936 aa20.83■□□□□ 0.92
IRF3-228ENST00000601291 MRGPREQ86SM8 312 aa20.83■□□□□ 0.92
IRF3-228ENST00000601291 PRR22Q8IZ63 422 aa20.83■□□□□ 0.92
IRF3-228ENST00000601291 ZNF527Q8NB42 609 aa20.83■□□□□ 0.92
IRF3-228ENST00000601291 THAP3Q8WTV1 239 aaPredicted RBP20.83■□□□□ 0.92
IRF3-228ENST00000601291 APOBEC4Q8WW27 367 aaKnown RBP20.83■□□□□ 0.92
IRF3-228ENST00000601291 OMA1Q96E52 524 aa20.83■□□□□ 0.92
IRF3-228ENST00000601291 IP6K3Q96PC2 410 aa20.83■□□□□ 0.92
IRF3-228ENST00000601291 P4HTMQ9NXG6 502 aa20.83■□□□□ 0.92
IRF3-228ENST00000601291 FBXL4Q9UKA2 621 aa20.83■□□□□ 0.92
IRF3-228ENST00000601291 FAM32AQ9Y421 112 aaKnown RBP20.83■□□□□ 0.92
IRF3-228ENST00000601291 MRPS18BQ9Y676 258 aaKnown RBP20.83■□□□□ 0.92
IRF3-228ENST00000601291 HS6ST1O60243 411 aa20.82■□□□□ 0.92
IRF3-228ENST00000601291 ABCD3P28288 659 aa20.82■□□□□ 0.92
IRF3-228ENST00000601291 PUM1Q14671 1186 aaKnown RBP eCLIP20.82■□□□□ 0.92
IRF3-228ENST00000601291 MAPK14Q16539 360 aa20.82■□□□□ 0.92
IRF3-228ENST00000601291 PDZK1Q5T2W1 519 aa20.82■□□□□ 0.92
IRF3-228ENST00000601291 AMER2Q8N7J2 671 aa20.82■□□□□ 0.92
IRF3-228ENST00000601291 ZNF614Q8N883 585 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms