RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 AP4B1Q9Y6B7 739 aa19.05■□□□□ 0.64
PNKP-212ENST00000599454 C17orf51A8MQB3 221 aa19.04■□□□□ 0.64
PNKP-212ENST00000599454 MYO1GB0I1T2 1018 aa19.04■□□□□ 0.64
PNKP-212ENST00000599454 POC1B-GALNT4F8VUJ3 575 aa19.04■□□□□ 0.64
PNKP-212ENST00000599454 H3BML4 177 aa19.04■□□□□ 0.64
PNKP-212ENST00000599454 TMCC2O75069 709 aa19.04■□□□□ 0.64
PNKP-212ENST00000599454 ENO1P06733 434 aaKnown RBP19.04■□□□□ 0.64
PNKP-212ENST00000599454 SNRPAP09012 282 aaKnown RBP19.04■□□□□ 0.64
PNKP-212ENST00000599454 CTAGE8P0CG41 777 aa19.04■□□□□ 0.64
PNKP-212ENST00000599454 PPP3CBP16298 524 aa19.04■□□□□ 0.64
PNKP-212ENST00000599454 LOXP28300 417 aaPredicted RBP19.04■□□□□ 0.64
PNKP-212ENST00000599454 PSMD4P55036 377 aaKnown RBP19.04■□□□□ 0.64
PNKP-212ENST00000599454 PON3Q15166 354 aa19.04■□□□□ 0.64
PNKP-212ENST00000599454 TEX35Q5T0J7 233 aa19.04■□□□□ 0.64
PNKP-212ENST00000599454 FAM214BQ7L5A3 538 aa19.04■□□□□ 0.64
PNKP-212ENST00000599454 ZNF550Q7Z398 422 aa19.04■□□□□ 0.64
PNKP-212ENST00000599454 LCA5Q86VQ0 697 aa19.04■□□□□ 0.64
PNKP-212ENST00000599454 CTAGE4Q8IX94 777 aa19.04■□□□□ 0.64
PNKP-212ENST00000599454 DCAKDQ8WVC6 231 aa19.04■□□□□ 0.64
PNKP-212ENST00000599454 APIPQ96GX9 242 aa19.04■□□□□ 0.64
PNKP-212ENST00000599454 HS3ST6Q96QI5 342 aa19.04■□□□□ 0.64
PNKP-212ENST00000599454 Q9N2J8 555 aa19.04■□□□□ 0.64
PNKP-212ENST00000599454 STOML1Q9UBI4 398 aa19.04■□□□□ 0.64
PNKP-212ENST00000599454 C19orf53Q9UNZ5 99 aaPredicted RBP19.04■□□□□ 0.64
PNKP-212ENST00000599454 CHD3Q12873 2000 aaKnown RBP19.03■□□□□ 0.64
PNKP-212ENST00000599454 DNHD1Q96M86 4753 aa19.03■□□□□ 0.64
PNKP-212ENST00000599454 SERTM1A2A2V5 107 aa19.03■□□□□ 0.64
PNKP-212ENST00000599454 SMAD7O15105 426 aaKnown RBP19.03■□□□□ 0.64
PNKP-212ENST00000599454 PAX1P15863 534 aa19.03■□□□□ 0.64
PNKP-212ENST00000599454 DDCP20711 480 aa19.03■□□□□ 0.64
PNKP-212ENST00000599454 PCSK6P29122 969 aa19.03■□□□□ 0.64
PNKP-212ENST00000599454 PTH2RP49190 550 aa19.03■□□□□ 0.64
PNKP-212ENST00000599454 PKNOX1P55347 436 aa19.03■□□□□ 0.64
PNKP-212ENST00000599454 PPP2R2BQ00005 443 aa19.03■□□□□ 0.64
PNKP-212ENST00000599454 STX5Q13190 355 aa19.03■□□□□ 0.64
PNKP-212ENST00000599454 BEX5Q5H9J7 111 aa19.03■□□□□ 0.64
PNKP-212ENST00000599454 SH2D4BQ5SQS7 431 aa19.03■□□□□ 0.64
PNKP-212ENST00000599454 LGSNQ5TDP6 509 aa19.03■□□□□ 0.64
PNKP-212ENST00000599454 FAM219BQ5XKK7 198 aa19.03■□□□□ 0.64
PNKP-212ENST00000599454 SYT10Q6XYQ8 523 aa19.03■□□□□ 0.64
PNKP-212ENST00000599454 PLEKHM3Q6ZWE6 761 aa19.03■□□□□ 0.64
PNKP-212ENST00000599454 PRIMA1Q86XR5 153 aa19.03■□□□□ 0.64
PNKP-212ENST00000599454 ZC3HAV1LQ96H79 300 aaKnown RBP19.03■□□□□ 0.64
PNKP-212ENST00000599454 TMEM237Q96Q45 408 aa19.03■□□□□ 0.64
PNKP-212ENST00000599454 HHATLQ9HCP6 504 aa19.03■□□□□ 0.64
PNKP-212ENST00000599454 FANCFQ9NPI8 374 aa19.03■□□□□ 0.64
PNKP-212ENST00000599454 IGLV3-32A0A0A0MS00 114 aa19.02■□□□□ 0.64
PNKP-212ENST00000599454 TTC36A6NLP5 189 aa19.02■□□□□ 0.64
PNKP-212ENST00000599454 H0YC42 278 aa19.02■□□□□ 0.64
PNKP-212ENST00000599454 IL33O95760 270 aa19.02■□□□□ 0.64
PNKP-212ENST00000599454 ANXA4P09525 319 aaPredicted RBP19.02■□□□□ 0.64
PNKP-212ENST00000599454 IMPDH1P20839 514 aa19.02■□□□□ 0.64
PNKP-212ENST00000599454 HTR6P50406 440 aa19.02■□□□□ 0.64
PNKP-212ENST00000599454 NCBP2P52298 156 aaKnown RBP eCLIP19.02■□□□□ 0.64
PNKP-212ENST00000599454 TPD52P55327 224 aaPredicted RBP19.02■□□□□ 0.64
PNKP-212ENST00000599454 CLDN20P56880 219 aa19.02■□□□□ 0.64
PNKP-212ENST00000599454 ZNF763Q0D2J5 394 aa19.02■□□□□ 0.64
PNKP-212ENST00000599454 LCP2Q13094 533 aa19.02■□□□□ 0.64
PNKP-212ENST00000599454 ZNHIT3Q15649 155 aaPredicted RBP19.02■□□□□ 0.64
PNKP-212ENST00000599454 SGCBQ16585 318 aa19.02■□□□□ 0.64
PNKP-212ENST00000599454 SLC22A9Q8IVM8 553 aa19.02■□□□□ 0.64
PNKP-212ENST00000599454 FMO2Q99518 471 aa19.02■□□□□ 0.64
PNKP-212ENST00000599454 EBPLQ9BY08 206 aa19.02■□□□□ 0.64
PNKP-212ENST00000599454 KLHL4Q9C0H6 718 aa19.02■□□□□ 0.64
PNKP-212ENST00000599454 C3orf14Q9HBI5 128 aa19.02■□□□□ 0.64
PNKP-212ENST00000599454 TAS2R7Q9NYW3 318 aa19.02■□□□□ 0.64
PNKP-212ENST00000599454 DMGDHQ9UI17 866 aaKnown RBP19.02■□□□□ 0.64
PNKP-212ENST00000599454 WBP11Q9Y2W2 641 aaKnown RBP19.02■□□□□ 0.64
PNKP-212ENST00000599454 EMC9Q9Y3B6 208 aa19.02■□□□□ 0.64
PNKP-212ENST00000599454 A0A087WUV0 522 aaPredicted RBP19.01■□□□□ 0.63
PNKP-212ENST00000599454 UQCRHLA0A096LP55 91 aa19.01■□□□□ 0.63
PNKP-212ENST00000599454 TRIM64A6NGJ6 449 aa19.01■□□□□ 0.63
PNKP-212ENST00000599454 TRIM64BA6NI03 449 aa19.01■□□□□ 0.63
PNKP-212ENST00000599454 DLX3O60479 287 aa19.01■□□□□ 0.63
PNKP-212ENST00000599454 PSMG1O95456 288 aa19.01■□□□□ 0.63
PNKP-212ENST00000599454 JUNP05412 331 aaKnown RBP19.01■□□□□ 0.63
PNKP-212ENST00000599454 IFI6P09912 130 aa19.01■□□□□ 0.63
PNKP-212ENST00000599454 ATP5F1P24539 256 aaPredicted RBP19.01■□□□□ 0.63
PNKP-212ENST00000599454 NTSP30990 170 aa19.01■□□□□ 0.63
PNKP-212ENST00000599454 C17orf67Q0P5P2 114 aa19.01■□□□□ 0.63
PNKP-212ENST00000599454 C2orf80Q0P641 193 aa19.01■□□□□ 0.63
PNKP-212ENST00000599454 TMEM107Q6UX40 140 aa19.01■□□□□ 0.63
PNKP-212ENST00000599454 OR2L13Q8N349 312 aa19.01■□□□□ 0.63
PNKP-212ENST00000599454 OR5M1Q8NGP8 315 aa19.01■□□□□ 0.63
PNKP-212ENST00000599454 OR6K3Q8NGY3 331 aa19.01■□□□□ 0.63
PNKP-212ENST00000599454 DUSP19Q8WTR2 217 aa19.01■□□□□ 0.63
PNKP-212ENST00000599454 IGFBPL1Q8WX77 278 aa19.01■□□□□ 0.63
PNKP-212ENST00000599454 LMF2Q9BU23 707 aaKnown RBP19.01■□□□□ 0.63
PNKP-212ENST00000599454 TBL1XR1Q9BZK7 514 aa19.01■□□□□ 0.63
PNKP-212ENST00000599454 RTN4RQ9BZR6 473 aa19.01■□□□□ 0.63
PNKP-212ENST00000599454 MIEF1Q9NQG6 463 aa19.01■□□□□ 0.63
PNKP-212ENST00000599454 PLSCR4Q9NRQ2 329 aa19.01■□□□□ 0.63
PNKP-212ENST00000599454 DDX18Q9NVP1 670 aaKnown RBP19.01■□□□□ 0.63
PNKP-212ENST00000599454 PAQR5Q9NXK6 330 aaPredicted RBP19.01■□□□□ 0.63
PNKP-212ENST00000599454 FLRT3Q9NZU0 649 aa19.01■□□□□ 0.63
PNKP-212ENST00000599454 TMEM216Q9P0N5 145 aa19.01■□□□□ 0.63
PNKP-212ENST00000599454 UPK1AO00322 258 aa19■□□□□ 0.63
PNKP-212ENST00000599454 CNOT4O95628 575 aaKnown RBP19■□□□□ 0.63
PNKP-212ENST00000599454 ZNF17P17021 662 aa19■□□□□ 0.63
PNKP-212ENST00000599454 NR1H2P55055 460 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms