RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 OCA2Q04671 838 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 SERTAD2Q14140 314 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 CDKN3Q16667 212 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 EIF2S3LQ2VIR3 472 aaKnown RBP4.8□□□□□ -1.64
PAF1-208ENST00000598594 ZNF385BQ569K4 471 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 CT45A2Q5DJT8 189 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 RTL6Q6ICC9 239 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 SPOPLQ6IQ16 392 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 ERICH1Q86X53 443 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 COMMD2Q86X83 199 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 CRLF3Q8IUI8 442 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 ZNF100Q8IYN0 542 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 KLHL36Q8N4N3 616 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 FAM89BQ8N5H3 189 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 POC1AQ8NBT0 407 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 FAM98AQ8NCA5 519 aaKnown RBP4.8□□□□□ -1.64
PAF1-208ENST00000598594 OR6M1Q8NGM8 313 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 OR1F12Q8NHA8 337 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 SPATA22Q8NHS9 363 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 NANPQ8TBE9 248 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 TCP10LQ8TDR4 215 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 SMARCD2Q92925 531 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 ERGIC1Q969X5 290 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 MTERF3Q96E29 417 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 BOD1Q96IK1 185 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 DNAJC1Q96KC8 554 aaKnown RBP4.8□□□□□ -1.64
PAF1-208ENST00000598594 SERPINB11Q96P15 392 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 FMO2Q99518 471 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 PAPOLGQ9BWT3 736 aaKnown RBP4.8□□□□□ -1.64
PAF1-208ENST00000598594 MAP1LC3CQ9BXW4 147 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 KRTAP9-9Q9BYP9 154 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 GBA3Q9H227 469 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 C1orf198Q9H425 327 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 WDR54Q9H977 334 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 CYSLTR2Q9NS75 346 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 SAMSN1Q9NSI8 373 aaKnown RBP4.8□□□□□ -1.64
PAF1-208ENST00000598594 PCMTD2Q9NV79 361 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 C1orf123Q9NWV4 160 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 ASB6Q9NWX5 421 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 NDE1Q9NXR1 346 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 RCC2Q9P258 522 aaKnown RBP4.8□□□□□ -1.64
PAF1-208ENST00000598594 MAN1B1Q9UKM7 699 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 SPATA2Q9UM82 520 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 ADAMTS5Q9UNA0 930 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 NSG2Q9Y328 171 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 TIMM10BQ9Y5J6 103 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 PTPRUQ92729 1446 aa4.8□□□□□ -1.64
PAF1-208ENST00000598594 KCNE1BA0A087WTH5 132 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 HYKKA2RU49 373 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 MARCH11A6NNE9 402 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 H0YL77 283 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 CLIC1O00299 241 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 ZBTB5O15062 677 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 ARPC1BO15143 372 aaKnown RBP4.79□□□□□ -1.64
PAF1-208ENST00000598594 FOXN1O15353 648 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 AQP9O43315 295 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 IDH3BO43837 385 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 TSPAN2O60636 221 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 VAMP5O95183 116 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 ADRB1P08588 477 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 SNRPAP09012 282 aaKnown RBP4.79□□□□□ -1.64
PAF1-208ENST00000598594 SLC35E2BP0CK96 405 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 SLC35E2P0CK97 266 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 SMIM10L1P0DMW3 83 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 IDO1P14902 403 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 HLA-DMAP28067 261 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 CHATP28329 748 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 RBMS1P29558 406 aaKnown RBP4.79□□□□□ -1.64
PAF1-208ENST00000598594 ACVR1BP36896 505 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 EIF2S3P41091 472 aaKnown RBP4.79□□□□□ -1.64
PAF1-208ENST00000598594 APOBEC1P41238 236 aaKnown RBP4.79□□□□□ -1.64
PAF1-208ENST00000598594 HTR5AP47898 357 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 GLIPR1P48060 266 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 MAZP56270 477 aaKnown RBP4.79□□□□□ -1.64
PAF1-208ENST00000598594 CXCR4P61073 352 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 MAGOHP61326 146 aaKnown RBP4.79□□□□□ -1.64
PAF1-208ENST00000598594 ERVK-8P63133 956 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 GABPAQ06546 454 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 SCRN3Q0VDG4 424 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 SLC17A1Q14916 467 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 TNXAQ16473 311 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 ODF4Q2M2E3 257 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 ZNF699Q32M78 642 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 GPR33Q49SQ1 333 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 ZNF542PQ5EBM4 170 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 ADNP2Q6IQ32 1131 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 CDC42EP5Q6NZY7 148 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 RHBDF2Q6PJF5 856 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 SERPINA11Q86U17 422 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 RANBP3LQ86VV4 465 aaPredicted RBP4.79□□□□□ -1.64
PAF1-208ENST00000598594 LDLRAD3Q86YD5 345 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 GPALPP1Q8IXQ4 340 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 ZNF34Q8IZ26 560 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 SPAG16Q8N0X2 631 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 BEST3Q8N1M1 668 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 SYS1Q8N2H4 156 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 SLC5A8Q8N695 610 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 GCSAMQ8N6F7 178 aa4.79□□□□□ -1.64
PAF1-208ENST00000598594 Q8N9G6 341 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms